NobleBlocks

Alcorn State University

UniversityFayette, Mississippi, United States

Research output, citation impact, and the most-cited recent papers from Alcorn State University (United States). Aggregated across the NobleBlocks index of 300M+ scholarly works.

Total works
907
Citations
18.9K
h-index
62
i10-index
408
Also known as
Alcorn State University

Top-cited papers from Alcorn State University

Computer-Aided Detection and Diagnosis of Breast Cancer With Mammography: Recent Advances
Jinshan Tang, Rangaraj M. Rangayyan, Jun Xu, I. El Naqa +1 more
2009· IEEE Transactions on Information Technology in Biomedicine620doi:10.1109/titb.2008.2009441

Breast cancer is the second-most common and leading cause of cancer death among women. It has become a major health issue in the world over the past 50 years, and its incidence has increased in recent years. Early detection is an effective way to diagnose and manage breast cancer. Computer-aided detection or diagnosis (CAD) systems can play a key role in the early detection of breast cancer and can reduce the death rate among women with breast cancer. The purpose of this paper is to provide an overview of recent advances in the development of CAD systems and related techniques. We begin with a brief introduction to some basic concepts related to breast cancer detection and diagnosis. We then focus on key CAD techniques developed recently for breast cancer, including detection of calcifications, detection of masses, detection of architectural distortion, detection of bilateral asymmetry, image enhancement, and image retrieval.

Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement
Z. Jeffrey Chen, Avinash Sreedasyam, Atsumi Ando, Qingxin Song +4 more
2020· Nature Genetics488doi:10.1038/s41588-020-0614-5

Abstract Polyploidy is an evolutionary innovation for many animals and all flowering plants, but its impact on selection and domestication remains elusive. Here we analyze genome evolution and diversification for all five allopolyploid cotton species, including economically important Upland and Pima cottons. Although these polyploid genomes are conserved in gene content and synteny, they have diversified by subgenomic transposon exchanges that equilibrate genome size, evolutionary rate heterogeneities and positive selection between homoeologs within and among lineages. These differential evolutionary trajectories are accompanied by gene-family diversification and homoeolog expression divergence among polyploid lineages. Selection and domestication drive parallel gene expression similarities in fibers of two cultivated cottons, involving coexpression networks and N 6 -methyladenosine RNA modifications. Furthermore, polyploidy induces recombination suppression, which correlates with altered epigenetic landscapes and can be overcome by wild introgression. These genomic insights will empower efforts to manipulate genetic recombination and modify epigenetic landscapes and target genes for crop improvement.

Managing the Strategic Transformation of Higher Education through Artificial Intelligence
Babu George, Ontario S. Wooden
2023· Administrative Sciences442doi:10.3390/admsci13090196

Considering the rapid advancements in artificial intelligence (AI) and their potential implications for the higher education sector, this article seeks to critically evaluate the strategic adoption of AI in the framework of “smart universities”. We envisage these innovative institutions as the imminent evolution in higher education, harnessing AI and quantum technologies to reshape academic and administrative processes. The core presumption is that through such integration, universities can achieve personalized learning trajectories, enhanced accessibility, economic efficiency, and a boost in overall operational performance. However, venturing into this new educational paradigm necessitates a thorough exploration of potential pitfalls, including questions surrounding educational quality, potential job losses, risks of bias, privacy breaches, and safety concerns. Our primary objective is to offer a balanced assessment to aid stakeholders in making informed strategic decisions about endorsing and advancing the smart university model. A pivotal factor in this discourse is the acceptance of qualifications from AI-enriched institutions by employers, a variable that may drastically redefine the education sector’s trajectory. Within the context of a comprehensive analysis of its broader societal impact, this article also delves into the ramifications of AI-driven innovations for historically Black colleges and universities (HBCUs).

The Management of Diabetes Mellitus Using Medicinal Plants and Vitamins
Clément G. Yedjou, Jameka Grigsby, Ariane Mbemi, Daryllynn Nelson +3 more
2023· International Journal of Molecular Sciences173doi:10.3390/ijms24109085

Diabetes mellitus (DM) is a serious chronic metabolic disease that is associated with hyperglycemia and several complications including cardiovascular disease and chronic kidney disease. DM is caused by high levels of blood sugar in the body associated with the disruption of insulin metabolism and homeostasis. Over time, DM can induce life-threatening health problems such as blindness, heart disease, kidney damage, and stroke. Although the cure of DM has improved over the past decades, its morbidity and mortality rates remain high. Hence, new therapeutic strategies are needed to overcome the burden of this disease. One such prevention and treatment strategy that is easily accessible to diabetic patients at low cost is the use of medicinal plants, vitamins, and essential elements. The research objective of this review article is to study DM and explore its treatment modalities based on medicinal plants and vitamins. To achieve our objective, we searched scientific databases of ongoing trials in PubMed Central, Medline databases, and Google Scholar websites. We also searched databases on World Health Organization International Clinical Trials Registry Platform to collect relevant papers. Results of numerous scientific investigations revealed that phytochemicals present in medicinal plants (Allium sativum, Momordica charantia, Hibiscus sabdariffa L., and Zingiber officinale) possess anti-hypoglycemic activities and show promise for the prevention and/or control of DM. Results also revealed that intake of vitamins C, D, E, or their combination improves the health of diabetes patients by reducing blood glucose, inflammation, lipid peroxidation, and blood pressure levels. However, very limited studies have addressed the health benefits of medicinal plants and vitamins as chemo-therapeutic/preventive agents for the management of DM. This review paper aims at addressing this knowledge gap by studying DM and highlighting the biomedical significance of the most potent medicinal plants and vitamins with hypoglycemic properties that show a great potential to prevent and/or treat DM.

Soy isoflavone glycitein protects against beta amyloid-induced toxicity and oxidative stress in transgenic Caenorhabditis elegans
Astrid Gutierrez-Zepeda, Ross Santell, Zhixin Wu, Marishka Brown +4 more
2005· BMC Neuroscience152doi:10.1186/1471-2202-6-54

BACKGROUND: Epidemiological studies have associated estrogen replacement therapy with a lower risk of developing Alzheimer's disease, but a higher risk of developing breast cancer and certain cardiovascular disorders. The neuroprotective effect of estrogen prompted us to determine potential therapeutic impact of soy-derived estrogenic compounds. Transgenic C. elegans, that express human beta amyloid (Abeta), were fed with soy derived isoflavones genistein, daidzein and glycitein (100 microg/ml) and then examined for Abeta-induced paralysis and the levels of reactive oxygen species. RESULTS: Among the three compounds tested, only glycitein alleviated Abeta expression-induced paralysis in the transgenic C. elegans. This activity of glycitein correlated with a reduced level of hydrogen peroxide in the transgenic C. elegans. In vitro scavenging effects of glycitein on three types of reactive oxygen species confirmed its antioxidant properties. Furthermore, the transgenic C. elegans fed with glycitein exhibited reduced formation of beta amyloid. CONCLUSION: These findings suggest that a specific soy isoflavone glycitein may suppress Abeta toxicity through combined antioxidative activity and inhibition of Abeta deposition, thus may have therapeutic potential for prevention of Abeta associated neurodegenerative disorders.

Mutualism–parasitism paradigm synthesized from results of root-endophyte models
Keerthi Mandyam, Ari Jumpponen
2015· Frontiers in Microbiology136doi:10.3389/fmicb.2014.00776

Plant tissues host a variety of fungi. One important group is the dark septate endophytes (DSEs) that colonize plant roots and form characteristic intracellular structures - melanized hyphae and microsclerotia. The DSE associations are common and frequently observed in various biomes and plant taxa. Reviews suggest that the proportion of plant species colonized by DSE equal that colonized by AM and microscopic studies show that the proportion of the root system colonized by fungi DSE can equal, or even exceed, the colonization by AM fungi. Despite the high frequency and suspected ecological importance, the effects of DSE colonization on plant growth and performance have remained unclear. Here, we draw from over a decade of experimentation with the obscure DSE symbiosis and synthesize across large bodies of published and unpublished data from Arabidopsis thaliana and Allium porrum model systems as well as from experiments that use native plants to better resolve the host responses to DSE colonization. The data indicate similar distribution of host responses in model and native plant studies, validating the use of model plants for tractable dissection of DSE symbioses. The available data also permit empirical testing of the environmental modulation of host responses to DSE colonization and refining the "mutualism-parasitism-continuum" paradigm for DSE symbioses. These data highlight the context dependency of the DSE symbioses: not only plant species but also ecotypes vary in their responses to populations of conspecific DSE fungi - environmental conditions further shift the host responses similar to those predicted based on the mutualism-parasitism-continuum paradigm. The model systems provide several established avenues of inquiry that permit more detailed molecular and functional dissection of fungal endophyte symbioses, identifying thus likely mechanisms that may underlie the observed host responses to endophyte colonization.

Structured H-Infinity Command and Control-Loop Design for Unmanned Helicopters
Jyotirmay Gadewadikar, Frank L. Lewis, Kamesh Subbarao, Ben M. Chen
2008· Journal of Guidance Control and Dynamics131doi:10.2514/1.31377

10.2514/1.31377

A Direct Image Contrast Enhancement Algorithm in the Wavelet Domain for Screening Mammograms
Jinshan Tang, Xiaoming Liu, Qingling Sun
2009· IEEE Journal of Selected Topics in Signal Processing125doi:10.1109/jstsp.2008.2011108

In breast cancer diagnosis, the radiologists mainly use their eyes to discern cancer when they screen the mammograms. However, in many cases, cancer is not easily detected by the eyes because of the bad imaging conditions. In order to improve the correct diagnosis rate of cancer, image-enhancement technology is often used to enhance the image and aid the radiologists. In this paper, we develop a new image-enhancement technology in the wavelet domain for radiologists to screen mammograms. The new image-enhancement algorithm has several advantages. First, the proposed image-enhancement technology modifies a multiscale measure which matches the human vision system and thus the enhanced images have better visual quality; second, the image enhancement is accomplished in the wavelet domain and thus it can save time if the image is compressed by wavelet transform based methods; third, the end users can adjust the enhancement by manipulating a single parameter. Experiments were performed on mammograms and the results are progressive.

Effect of Selenium-Enriched Probiotics on Laying Performance, Egg Quality, Egg Selenium Content, and Egg Glutathione Peroxidase Activity
Cuiling Pan, Yuxin Zhao, Shengfa F. Liao, Fu Chen +4 more
2011· Journal of Agricultural and Food Chemistry102doi:10.1021/jf202014k

A 35-day experiment was conducted to evaluate the effect of selenium-enriched probiotics (SP) on laying performance, egg quality, egg selenium (Se) content, and egg glutathione peroxidase (GPX) activity. Five hundred 58-week-old Rohman laying hens were randomly allotted to 5 dietary treatments of 100 each. Each treatment had 5 replicates, and each replicate had 5 cages with 4 hens per cage. The SP was supplemented to a corn-soybean-meal basal diet at 3 different levels that supplied total Se at 0.2, 0.5, and 1.0 mg/kg. The basal diet served as a blank control, while the basal diet with supplemental probiotics served as a probiotics control. The results showed that dietary SP supplementation not only increased (p < 0.05) the rate of egg laying, day egg weight, mean egg weight, egg Se content, and egg GPX activity but also decreased (p < 0.05) the feed:egg ratio and egg cholesterol content. The egg Se content was gradually increased (p < 0.05) along with the increasing level of dietary Se. The SP supplementation also slowed down (p < 0.05) the drop of Haugh units (HU) of eggs stored at room temperature. The egg GPX activity had a positive correlation (p < 0.01) with egg Se content and a negative correlation (p < 0.01) with egg HU drop. These results suggested that Se contents, GPX activity, and HU of eggs were affected by the dietary Se level, whereas the egg-laying performance and egg cholesterol content were affected by the dietary probiotics. It was concluded that this SP is an effective feed additive that combines the organic Se benefit for hen and human health with the probiotics benefit for laying hen production performance. It was also suggested that the eggs from hens fed this SP can serve as a nutraceutical food with high Se and low cholesterol contents for both healthy people and patients with hyperlipidemia, fatty liver, or cardiovascular disease.

Definition of Soybean Genomic Regions That Control Seed Phytoestrogen Amounts
My Abdelmajid Kassem, Khalid Meksem, M. J. Iqbal, V. N. Njiti +4 more
2004· BioMed Research International98doi:10.1155/s1110724304304018

Soybean seeds contain large amounts of isoflavones or phytoestrogens such as genistein, daidzein, and glycitein that display biological effects when ingested by humans and animals. In seeds, the total amount, and amount of each type, of isoflavone varies by 5 fold between cultivars and locations. Isoflavone content and quality are one key to the biological effects of soy foods, dietary supplements, and nutraceuticals. Previously we had identified 6 loci (QTL) controlling isoflavone content using 150 DNA markers. This study aimed to identify and delimit loci underlying heritable variation in isoflavone content with additional DNA markers. We used a recombinant inbred line (RIL) population ( $n=100$ ) derived from the cross of “Essex” by “Forrest,” two cultivars that contrast for isoflavone content. Seed isoflavone content of each RIL was determined by HPLC and compared against 240 polymorphic microsatellite markers by one-way analysis of variance. Two QTL that underlie seed isoflavone content were newly discovered. The additional markers confirmed and refined the positions of the six QTL already reported. The first new region anchored by the marker BARC-Satt063 was significantly associated with genistein ( $P=0.009$, $Rcirc;2=29.5\%$ ) and daidzein ( $P=0.007$, $Rcirc;2=17.0\%$ ). The region is located on linkage group B2 and derived the beneficial allele from Essex. The second new region defined by the marker BARC-Satt129 was significantly associated with total glycitein ( $P=0.0005$, $Rcirc;2=32.0\%$ ). The region is located on linkage group D1a+Q and also derived the beneficial allele from Essex. Jointly the eight loci can explain the heritable variation in isoflavone content. The loci may be used to stabilize seed isoflavone content by selection and to isolate the underlying genes.

IoT-Enabled Biosensors in Food Packaging: A Breakthrough in Food Safety for Monitoring Risks in Real Time
Abdus Sobhan, Abul Hossain, Lin Wei, Kasiviswanathan Muthukumarappan +1 more
2025· Foods95doi:10.3390/foods14081403

The integration of biosensors and the Internet of Things (IoT) in food packaging is gaining significant interest in rapidly enhancing food safety and traceability worldwide. Currently, the IoT is one of the most intriguing topics in the digital and virtual world. Biosensors can be integrated into food packaging to monitor, sense, and identify early signs of food spoilage or freshness. When coupled with the IoT, these biosensors can contribute to data transmission via IoT networks, providing real-time insights into food storage and transportation conditions for stakeholders across each stage of the food supply chain, facilitating proactive decision-making practices. The technologies of combining biosensors with IoT could leverage artificial intelligence (AI) to enhance food safety, quality, and security in food industries, compared to conventional existing food inspection technologies, which are limited to assessing weight, volume, color, and physical appearance. This review focused on highlighting the latest and existing advancements, identifying the knowledge gaps in the applications of biosensors and the IoT, and exploring their opportunities to shape future food packaging, particularly in the context of 21st-century food safety. The review also aims to investigate the role of the IoT in creating smart food ecosystems and examines how data transmitted from biosensors to IoT systems can be stored in cloud-based platforms, in addition to addressing upcoming research challenges. Concerns of data privacy, security, and regulatory compliance in implementing the IoT and biosensors for food packaging are also addressed, along with potential solutions to overcome these barriers.

A Foxtail mosaic virus Vector for Virus-Induced Gene Silencing in Maize
Mei Yu, Chunquan Zhang, Bliss M. Kernodle, John H. Hill +1 more
2016· PLANT PHYSIOLOGY94doi:10.1104/pp.16.00172

Plant viruses have been widely used as vectors for foreign gene expression and virus-induced gene silencing (VIGS). A limited number of viruses have been developed into viral vectors for the purposes of gene expression or VIGS in monocotyledonous plants, and among these, the tripartite viruses Brome mosaic virus and Cucumber mosaic virus have been shown to induce VIGS in maize (Zea mays). We describe here a new DNA-based VIGS system derived from Foxtail mosaic virus (FoMV), a monopartite virus that is able to establish systemic infection and silencing of endogenous maize genes homologous to gene fragments inserted into the FoMV genome. To demonstrate VIGS applications of this FoMV vector system, four genes, phytoene desaturase (functions in carotenoid biosynthesis), lesion mimic22 (encodes a key enzyme of the porphyrin pathway), iojap (functions in plastid development), and brown midrib3 (caffeic acid O-methyltransferase), were silenced and characterized in the sweet corn line Golden × Bantam. Furthermore, we demonstrate that the FoMV infectious clone establishes systemic infection in maize inbred lines, sorghum (Sorghum bicolor), and green foxtail (Setaria viridis), indicating the potential wide applications of this viral vector system for functional genomics studies in maize and other monocots.

Breast cancer screening using convolutional neural network and follow-up digital mammography
Yufeng Zheng, Clifford Yang, А. О. Меркулов
201893doi:10.1117/12.2304564

We propose a computer-aided detection (CAD) method for breast cancer screening using convolutional neural network (CNN) and follow-up scans. First, mammographic images are examined by three cascading object detectors to detect suspicious cancerous regions. Then all regional images are fed to a trained CNN (based on the pre-trained VGG-19 model) to filter out false positives. Three cascading detectors are trained with Haar features, local binary pattern (LBP) and histograms of oriented gradient (HOG) separately via an AdaBoost approach. The bounding boxes (BBs) from three featured detectors are merged to generate a region proposal. Each regional image, consisting of three channels, current scan (red channel), registered prior scan (green channel) and their difference (blue channel), is scaled to 224×224×3 for CNN classification. We tested the proposed method using our digital mammographic database including 69 cancerous subjects of mass, architecture distortion, and 27 healthy subjects, each of which includes two scans, current (cancerous or healthy), prior scan (healthy 1 year before). On average 165 BBs are created by three cascading classifiers on each mammogram, but only 3 BBs remained per image after the CNN classification. The overall performance is described as follows: sensitivity = 0.928, specificity = 0.991, FNR = 0.072, and FPI (false positives per image) = 0.004. Considering the early-stage cancerous status (1-year ago was normal), the performance of the proposed CAD method is very promising.

TonB‐dependent transporters in the Bacteroidetes: Unique domain structures and potential functions
Rebecca M. Pollet, Lauryn M. Martin, Nicole M. Koropatkin
2021· Molecular Microbiology86doi:10.1111/mmi.14683

The human gut microbiota endows the host with a wealth of metabolic functions central to health, one of which is the degradation and fermentation of complex carbohydrates. The Bacteroidetes are one of the dominant bacterial phyla of this community and possess an expanded capacity for glycan utilization. This is mediated via the coordinated expression of discrete polysaccharide utilization loci (PUL) that invariantly encode a TonB-dependent transporter (SusC) that works with a glycan-capturing lipoprotein (SusD). More broadly within Gram-negative bacteria, TonB-dependent transporters (TBDTs) are deployed for the uptake of not only sugars, but also more often for essential nutrients such as iron and vitamins. Here, we provide a comprehensive look at the repertoire of TBDTs found in the model gut symbiont Bacteroides thetaiotaomicron and the range of predicted functional domains associated with these transporters and SusD proteins for the uptake of both glycans and other nutrients. This atlas of the B. thetaiotaomicron TBDTs reveals that there are at least three distinct subtypes of these transporters encoded within its genome that are presumably regulated in different ways to tune nutrient uptake.

Qualitative and quantitative comparisons of multispectral night vision colorization techniques
Yufeng Zheng, Wenjie Dong, Erik Blasch
2012· Optical Engineering82doi:10.1117/1.oe.51.8.087004

Multispectral images enable robust night vision (NV) object assessment over day-night conditions. Furthermore, colorized multispectral NV images can enhance human vision by improving observer object classification and reaction times, especially for low light conditions. NV colorization techniques can produce the colorized images that closely resemble natural scenes. Qualitative (subjective) and quantitative (objective) comparisons of NV colorization techniques proposed in the past decade are made and two categories of coloring methods, color fusion and color mapping, are discussed and compared. Color fusion directly combines multispectral NV images into a color-version image by mixing pixel intensities at different color planes, of which a channel-based color fusion method is reviewed. Color-mapping usually maps the color properties of a false-colored NV image (source) onto that of a truecolor daylight target picture (reference). Four coloring-mapping methods-statistical matching, histogram matching, joint histogram matching, and look-up table (LUT)-are presented and compared, including a new color-mapping method called joint-histogram matching (JHM). The experimental NV imagery includes visible (Red-Green-Blue), image-intensified, near infrared, and long-wave infrared images. The qualitative evaluations are conducted by visual inspections of the colorized images, whereas the quantitative evaluations are achieved by a newly proposed metric, objective evaluation index. From the experimental results according to both qualitative and quantitative evaluations, the following conclusions can be drawn: the segmentation-based colorization method produces very impressive and realistic colors but requires intense computations; color fusion and LUT-based methods run very fast but with less realistic results; the statistic-matching method always provides acceptable results; histogram matching and joint-histogram matching can generate impressive and vivid colors when the color distributions between source and target are similar; and the statistic-matching then joint-histogram matching (SM-JHM) method is a reliable and efficient method recommended from both qualitative and quantitative evaluations.

Reduction of <i>Phakopsora pachyrhizi</i> infection on soybean through host‐ and spray‐induced gene silencing
Dongfang Hu, Zhi‐Yuan Chen, Chunquan Zhang, Mala Ganiger
2020· Molecular Plant Pathology79doi:10.1111/mpp.12931

Asian soybean rust (ASR), caused by the obligate fungal pathogen Phakopsora pachyrhizi, often leads to significant yield losses and can only be managed through fungicide applications currently. In the present study, eight urediniospore germination or appressorium formation induced P. pachyrhizi genes were investigated for their feasibility to suppress ASR through a bean pod mottle virus (BPMV)-based host-induced gene silencing (HIGS) strategy. Soybean plants expressing three of these modified BPMV vectors suppressed the expression of their corresponding target gene by 45%-80%, fungal biomass accumulation by 58%-80%, and significantly reduced ASR symptom development in soybean leaves after the plants were inoculated with P. pachyrhizi, demonstrating that HIGS can be used to manage ASR. In addition, when the in vitro synthesized double-stranded RNAs (dsRNAs) for three of the genes encoding an acetyl-CoA acyltransferase, a 40S ribosomal protein S16, and glycine cleavage system H protein were sprayed directly onto detached soybean leaves prior to P. pachyrhizi inoculation, they also resulted in an average of over 73% reduction of pustule numbers and 75% reduction in P. pachyrhizi biomass accumulation on the detached leaves compared to the controls. To the best of our knowledge, this is the first report of suppressing P. pachyrhizi infection in soybean through both HIGS and spray-induced gene silencing. It was demonstrated that either HIGS constructs targeting P. pachyrhizi genes or direct dsRNA spray application could be an effective strategy for reducing ASR development on soybean.

Comparison of passive and active leisure activities and life satisfaction with aging
Dongwook Cho, Jay Post, Sung Kyeom Kim
2017· Geriatrics and gerontology international/Geriatrics & gerontology international77doi:10.1111/ggi.13188

AIM: Many older adults face limitations to participating in active leisure activities as a result of their physical constraints from aging. Passive leisure activities become alternative leisure activities for older adults as a result of limited physical capacity. The present study sought to determine whether there exists a difference in the frequency of participation in passive and active leisure activities, and the effect of participation in passive and active leisure activities on the life satisfaction level of old adults. METHODS: A total of 460 participants aged 60-95 years were randomly selected from 21 sites in the USA. The Life Satisfaction Index - Z and the Meaningful Activity Participation Assessment were analyzed to examine older adults' life satisfaction and frequency of active or passive activities. RESULTS: The results showed that participation in passive leisure activities, such reading, talking on the telephone and watching TV/listening to the radio, is more frequent among older adults (P = 0.000). The regression coefficient found that club/organization or volunteering (P = 0.008), homemaking/maintenance (P = 0.017) and traveling (P = 0.017) for active leisure activities were statistically significant predictors of Life Satisfaction Index - Z for older adults. CONCLUSIONS: The current study shows that older adults spent much more times participating in passive leisure activities, such as radio/watching TV, talking on the phone and reading. The result also showed that active leisure activities, such as club/organization or volunteering, home making/maintenance and traveling, were significant predictors of life satisfaction for older adults controlling for covariates. The current study suggests marketing and programming plans to overcome the constraints that influence older adults' life satisfaction. Geriatr Gerontol Int 2018; 18: 380-386.

ISSR and AFLP Markers Differ among American Watermelon Cultivars with Limited Genetic Diversity
Amnon Levi, Claude E. Thomas, M. Newman, O.U.K. Reddy +2 more
2004· Journal of the American Society for Horticultural Science71doi:10.21273/jashs.129.4.0553

Wide phenotypic diversity exists among American heirloom cultivars of watermelon ( Citrullus lanatus var. lanatus ). However, in published studies, low or no polymorphism was revealed among those heirlooms using isozyme or randomly amplified polymorphic DNA (RAPD) markers. In this study, experiments with inter-simple sequence repeat (ISSR) [also known as simple sequence repeat-(SSR-) anchored primers] and amplified fragment-length polymorphism (AFLP) markers produced high polymorphisms among watermelon heirloom cultivars. ISSR (111) and AFLP (118) markers (229 total) identified 80.2% to 97.8% genetic similarity among heirloom cultivars. The phylogenetic relations based on ISSR and AFLP markers are highly consistent with the parental records available for some of the heirloom cultivars, providing confidence in the dendogram constructed for heirlooms based on similarity values. As compared with RAPD markers, ISSRs and AFLPs are highly effective in differentiating among watermelon cultivars or elite lines with limited genetic diversity.

Genome-Wide Differentiation of Various Melon Horticultural Groups for Use in GWAS for Fruit Firmness and Construction of a High Resolution Genetic Map
Padma Nimmakayala, Yan R. Tomason, Venkata Lakshmi Abburi, Alejandra Alvarado +4 more
2016· Frontiers in Plant Science67doi:10.3389/fpls.2016.01437

Melon (Cucumis melo L.) is a phenotypically diverse eudicot diploid (2n = 2x =24) has climacteric and non-climacteric morphotypes and show wide variation for fruit firmness, an important trait for transportation and shelf life. We generated 13,789 SNP markers using genotyping-by-sequencing and anchored them to chromosomes to understand genome-wide fixation indices (Fst) between various melon morphotypes and genomewide linkage disequilibrium (LD) decay. The FST between accessions of cantalupensis and inodorus was 0.23. The FST between cantalupensis and various agrestis accessions was in a range of 0.19 to 0.53 and between inodorus and agrestis accessions was in a range of 0.21 to 0.59 indicating sporadic to wide ranging introgression. The EM (Expectation Maximization) algorithm was used for estimation of 1,436 haplotypes. Average genome-wide LD decay for the melon genome was noted to be 9.27 Kb. In the current research, we focused on the genome-wide divergence underlying diverse melon horticultural groups. A high-resolution genetic map with 7153 loci was constructed. Genome-wide segregation distortion and recombination rate across various chromosomes were characterized. Melon has climacteric and non-climacteric morphotypes and wide variation for fruit firmness, a very important trait for transportation and shelf life. Various levels of QTLs were identified with high to moderate stringency and linked to fruit firmness using both genome-wide association study (GWAS) and biparental mapping. Gene annotation revealed some of the SNPs are located in -D-xylosidase, glyoxysomal malate synthase, chloroplastic anthranilate phosphoribosyltransferase, and histidine kinase, the genes that were previously characterized for fruit ripening and softening in other crops.

Hierarchical Models of Social Competence in Preschool Children: A Multisite, Multinational Study
Brian E. Vaughn, Nana Shin, Mina Kim, Gabrielle Coppola +4 more
2009· Child Development67doi:10.1111/j.1467-8624.2009.01367.x

The generality of a multilevel factorial model of social competence (SC) for preschool children was tested in a 5-group, multinational sample (N = 1,540) using confirmatory factor analysis. The model fits the observed data well, and tests constraining paths for measured variables to their respective first-order factors across samples also fit well. Equivalence of measurement models was found at sample and sex within-sample levels but not for age within sample. In 2 groups, teachers' ratings were examined as correlates of SC indicators. Composites of SC indicators were significantly associated with both positive and negative child attributes from the teachers' ratings. The findings contribute to understanding of both methodological and substantive issues concerning SC in young children.