Hawaii Pacific University

Assessing Biodiversity Declines Understanding human impact on biodiversity depends on sound quantitative projection. Pereira et al. (p. 1496 , published online 26 October) review quantitative scenarios that have been developed for four main areas of concern: species extinctions, species abundances and community structure, habitat loss and degradation, and shifts in the distribution of species and biomes. Declines in biodiversity are projected for the whole of the 21st century in all scenarios, but with a wide range of variation. Hoffmann et al. (p. 1503 , published online 26 October) draw on the results of five decades' worth of data collection, managed by the International Union for Conservation of Nature Species Survival Commission. A comprehensive synthesis of the conservation status of the world's vertebrates, based on an analysis of 25,780 species (approximately half of total vertebrate diversity), is presented: Approximately 20% of all vertebrate species are at risk of extinction in the wild, and 11% of threatened birds and 17% of threatened mammals have moved closer to extinction over time. Despite these trends, overall declines would have been significantly worse in the absence of conservation actions.

In recent years, the Indian Ocean (IO) has been discovered to have a much larger impact on climate variability than previously thought. This paper reviews climate phenomena and processes in which the IO is, or appears to be, actively involved. We begin with an update of the IO mean circulation and monsoon system. It is followed by reviews of ocean/atmosphere phenomenon at intraseasonal, interannual, and longer time scales. Much of our review addresses the two important types of interannual variability in the IO, El Niño–Southern Oscillation (ENSO) and the recently identified Indian Ocean Dipole (IOD). IOD events are often triggered by ENSO but can also occur independently, subject to eastern tropical preconditioning. Over the past decades, IO sea surface temperatures and heat content have been increasing, and model studies suggest significant roles of decadal trends in both the Walker circulation and the Southern Annular Mode. Prediction of IO climate variability is still at the experimental stage, with varied success. Essential requirements for better predictions are improved models and enhanced observations.

Human pressures on the ocean are thought to be increasing globally, yet we know little about their patterns of cumulative change, which pressures are most responsible for change, and which places are experiencing the greatest increases. Managers and policymakers require such information to make strategic decisions and monitor progress towards management objectives. Here we calculate and map recent change over 5 years in cumulative impacts to marine ecosystems globally from fishing, climate change, and ocean- and land-based stressors. Nearly 66% of the ocean and 77% of national jurisdictions show increased human impact, driven mostly by climate change pressures. Five percent of the ocean is heavily impacted with increasing pressures, requiring management attention. Ten percent has very low impact with decreasing pressures. Our results provide large-scale guidance about where to prioritize management efforts and affirm the importance of addressing climate change to maintain and improve the condition of marine ecosystems.

There have been five Mass Extinction events in the history of Earth's biodiversity, all caused by dramatic but natural phenomena. It has been claimed that the Sixth Mass Extinction may be underway, this time caused entirely by humans. Although considerable evidence indicates that there is a biodiversity crisis of increasing extinctions and plummeting abundances, some do not accept that this amounts to a Sixth Mass Extinction. Often, they use the IUCN Red List to support their stance, arguing that the rate of species loss does not differ from the background rate. However, the Red List is heavily biased: almost all birds and mammals but only a minute fraction of invertebrates have been evaluated against conservation criteria. Incorporating estimates of the true number of invertebrate extinctions leads to the conclusion that the rate vastly exceeds the background rate and that we may indeed be witnessing the start of the Sixth Mass Extinction. As an example, we focus on molluscs, the second largest phylum in numbers of known species, and, extrapolating boldly, estimate that, since around AD 1500, possibly as many as 7.5-13% (150,000-260,000) of all ~2 million known species have already gone extinct, orders of magnitude greater than the 882 (0.04%) on the Red List. We review differences in extinction rates according to realms: marine species face significant threats but, although previous mass extinctions were largely defined by marine invertebrates, there is no evidence that the marine biota has reached the same crisis as the non-marine biota. Island species have suffered far greater rates than continental ones. Plants face similar conservation biases as do invertebrates, although there are hints they may have suffered lower extinction rates. There are also those who do not deny an extinction crisis but accept it as a new trajectory of evolution, because humans are part of the natural world; some even embrace it, with a desire to manipulate it for human benefit. We take issue with these stances. Humans are the only species able to manipulate the Earth on a grand scale, and they have allowed the current crisis to happen. Despite multiple conservation initiatives at various levels, most are not species oriented (certain charismatic vertebrates excepted) and specific actions to protect every living species individually are simply unfeasible because of the tyranny of numbers. As systematic biologists, we encourage the nurturing of the innate human appreciation of biodiversity, but we reaffirm the message that the biodiversity that makes our world so fascinating, beautiful and functional is vanishing unnoticed at an unprecedented rate. In the face of a mounting crisis, scientists must adopt the practices of preventive archaeology, and collect and document as many species as possible before they disappear. All this depends on reviving the venerable study of natural history and taxonomy. Denying the crisis, simply accepting it and doing nothing, or even embracing it for the ostensible benefit of humanity, are not appropriate options and pave the way for the Earth to continue on its sad trajectory towards a Sixth Mass Extinction.

Observational evidence presented here indicates that the surface temperatures on the Tibetan Plateau (TP) have increased by about 1.8°C over the past 50 years. The precipitation pattern that is projected as a result of this warming resembles the leading pattern of precipitation variations in East Asia (EA). Numerical experiments with atmospheric general circulation models show that atmospheric heating induced by the rising TP temperatures can enhance East Asian subtropical frontal rainfall. The mechanism of the linkage is found to be through two distinct Rossby wave trains and the isentropic uplift to the east of the TP, which deform the western Pacific Subtropical High and enhance moisture convergence toward the EA subtropical front. The model calculations suggest that the past changes in TP temperatures and EA summer rainfall may be linked, and that projected future increases in TP temperatures may lead to further enhanced summer frontal rainfall in EA region.

World governments have committed to halting human-induced extinctions and safeguarding important sites for biodiversity by 2020, but the financial costs of meeting these targets are largely unknown. We estimate the cost of reducing the extinction risk of all globally threatened bird species (by ≥1 International Union for Conservation of Nature Red List category) to be U.S. $0.875 to $1.23 billion annually over the next decade, of which 12% is currently funded. Incorporating threatened nonavian species increases this total to U.S. $3.41 to $4.76 billion annually. We estimate that protecting and effectively managing all terrestrial sites of global avian conservation significance (11,731 Important Bird Areas) would cost U.S. $65.1 billion annually. Adding sites for other taxa increases this to U.S. $76.1 billion annually. Meeting these targets will require conservation funding to increase by at least an order of magnitude.

The increasing cultural diversity among professional social workers has resulted in the need to examine critically some of the earlier notions about the epistemology, ontology, and methodology of social work research and practice. One outcome of these analyses about how and by whom research projects are carried out is the emergence of "native," "indigenous," or "insider" research in which scholars conduct studies with populations and communities and identity groups of which they are also members. This article reports the work of a native social work researcher who conducted an ethnographic study with her social identity group. The complex and inherent challenges of being both an insider with intimate knowledge of one's study population and an outsider as researcher are explored. Implications for social work research and practice with regard to native social work perspectives and methods also are discussed.

There is clear evidence that parents can and do influence children. There is equally clear evidence that children’s genetic makeup affects their own behavioral characteristics, and also influences the way they are treated by their parents. Twin and ...Read More

Seasonal and interannual variations of summer upwelling off the South Vietnam coast and the offshore spread of cold water are investigated using a suite of new satellite measurements. In summer, as the southwesterly winds impinge on Annam Cordillera (a north‐south running mountain range on the east coast of Indochina) a strong wind jet occurs at its southern tip offshore east of Saigon, resulting in strong wind curls that are important for ocean upwelling off the coast. In July and August an anticyclonic ocean eddy develops to the southeast, advecting the cold coastal water offshore into the open South China Sea (SCS). The center of this cold filament is located consistently north of the wind speed maximum, indicating that open‐ocean upwelling helps to cool the ocean surface. Corroborating evidence for the cold filament is found in ocean color observations that reveal a collocated tongue of high chlorophyll concentration. The development of this cold filament disrupts the summer warming of the SCS and causes a pronounced semi‐annual cycle in SST. Moreover, the cold filament is an important player in interannual variability in the summer SCS. In 1998, the cold filament and mid‐summer cooling never took place, giving rise to a strong basin‐wide surface warming. Interannual SST variance has a local maximum over the climatological cold filament, and is much greater than the variance over the adjacent Indian and western Pacific Oceans. A cold filament index is constructed, which displays significant lagged correlation with SST in the eastern equatorial Pacific and Indian Oceans, indicative of a teleconnection from El Nino.

The broaden-and-build theory of positive emotions suggests that positive emotions can widen the range of potential coping strategies that come to mind and subsequently enhance one's resilience against stress. Studies have shown that high stress, especially chronic levels of stress, strongly contributes to the development of anxiety and depressive symptoms. However, researchers have also found that individuals who possess high levels of resilience are protected from stress and thus report lower levels of anxiety and depressive symptoms. Using a sample of 200 postdoctoral research fellows, the present study examined if (a) positive emotions were associated with greater resilience, (b) coping strategies mediated the link between positive emotions and resilience and (c) resilience moderated the influence of stress on trait anxiety and depressive symptoms. Results support the broaden-and-build theory in that positive emotions may enhance resilience directly as well as indirectly through the mediating role of coping strategies-particularly via adaptive coping. Resilience also moderated the association of stress with trait anxiety and depressive symptoms. Although stress is unavoidable and its influences on anxiety and depressive symptoms are undeniable, the likelihood of postdocs developing anxiety or depressive symptoms may be reduced by implementing programmes designed to increase positive emotions, adaptive coping strategies and resilience.

Microplastic pollution research has suffered from inadequate data and tools for spectral (Raman and infrared) classification. Spectral matching tools often are not accurate for microplastics identification and are cost-prohibitive. Lack of accuracy stems from the diversity of microplastic pollutants, which are not represented in spectral libraries. Here, we propose a viable software solution: Open Specy. Open Specy is on the web (www.openspecy.org) and in an R package. Open Specy is free and allows users to view, process, identify, and share their spectra to a community library. Users can upload and process their spectra using smoothing (Savitzky-Golay filter) and polynomial baseline correction techniques (IModPolyFit). The processed spectrum can be downloaded to be used in other applications or identified using an onboard reference library and correlation-based matching criteria. Open Specy's data sharing and session log features ensure reproducible results. Open Specy houses a growing library of reference spectra, which increasingly represents the diversity of microplastics as a contaminant suite. We compared the functionality and accuracy of Open Specy for microplastic identification to commonly used spectral analysis software. We found that Open Specy was the only open source software and the only software with a community library, and Open Specy had comparable accuracy to popular software (OMNIC Picta and KnowItAll). Future developments will enhance spectral identification accuracy as the reference library and functionality grows through community-contributed spectra and community-developed code. Open Specy can also be used for applications beyond microplastic analysis. Open Specy's source code is open source (CC-BY-4.0, attribution only) (https://github.com/wincowgerDEV/OpenSpecy).

Emerging virtual worlds, such as the prominent Second Life, offer unprecedented opportunities for companies to collaborate with co-creating users. However, pioneering corporate co-creation systems fail to attract a satisfying level of participation and engagement. The experience users have with the co-creation system is the key to making virtual places a vibrant source of great connections, creativity, and co-creation. While prior research on co-creation serves as a foundation for this work, it does not provide adequate guidance on how to design co-creation systems in virtual worlds. To address this shortcoming, a 20-month action research project was conducted to study the user’s experience and to identify design principles for virtual co-creation systems. In two action research cycles, a virtual co-creation system called Ideation Quest was created, deployed, evaluated, and improved. The study reveals how to design co-creation systems and enriches research on co-creation to fit the virtual world context. Practitioners receive a helpful framework to leverage virtual worlds for co-creation.

A distinctive strong tropospheric cooling trend is found in East Asia during July and August. The cooling trend is most prominent at the upper troposphere around 300 hPa. Accompanying this summer cooling the upper‐level westerly jet stream over East Asia shifts southward and the East Asian summer monsoon weakens, which results in the tendency toward increased droughts in northern China and flood in Yangtze River Valley. The observational evidences raise the possibility that the East Asian summer tropospheric cooling links to the stratosphere temperature changes and the interaction between the troposphere and stratosphere.

The ubiquitous pollution of the environment with microplastics, a diverse suite of contaminants, is of growing concern for science and currently receives considerable public, political, and academic attention. The potential impact of microplastics in the environment has prompted a great deal of research in recent years. Many diverse methods have been developed to answer different questions about microplastic pollution, from sources, transport, and fate in the environment, and about effects on humans and wildlife. These methods are often insufficiently described, making studies neither comparable nor reproducible. The proliferation of new microplastic investigations and cross-study syntheses to answer larger scale questions are hampered. This diverse group of 23 researchers think these issues can begin to be overcome through the adoption of a set of reporting guidelines. This collaboration was created using an open science framework that we detail for future use. Here, we suggest harmonized reporting guidelines for microplastic studies in environmental and laboratory settings through all steps of a typical study, including best practices for reporting materials, quality assurance/quality control, data, field sampling, sample preparation, microplastic identification, microplastic categorization, microplastic quantification, and considerations for toxicology studies. We developed three easy to use documents, a detailed document, a checklist, and a mind map, that can be used to reference the reporting guidelines quickly. We intend that these reporting guidelines support the annotation, dissemination, interpretation, reviewing, and synthesis of microplastic research. Through open access licensing (CC BY 4.0), these documents aim to increase the validity, reproducibility, and comparability of studies in this field for the benefit of the global community.

Tracheal cytotoxin (TCT), a fragment of the bacterial surface molecule peptidoglycan (PGN), is the factor responsible for the extensive tissue damage characteristic of whooping cough and gonorrhea infections. Here, we report that Vibrio fischeri also releases TCT, which acts in synergy with lipopolysaccharide (LPS) to trigger tissue development in its mutualistic symbiosis with the squid Euprymna scolopes. As components of PGN and LPS have commonly been linked with pathogenesis in animals, these findings demonstrate that host interpretation of these bacterial signal molecules is context dependent. Therefore, such differences in interpretation can lead to either inflammation and disease or to the establishment of a mutually beneficial animal-microbe association.

Our understanding of migratory birds' year‐round ecology and evolution remains patchy despite recent fundamental advances. Periodic reviews focus future research and inform conservation and management; here, we take advantage of our combined experiences working on Western Hemisphere avian migration systems to highlight recent lessons and critical gaps in knowledge. Among topics discussed are: (1) The pipeline from pure to applied researchers leaves room for improvement. (2) Population limitation and regulation includes both seasonal and between‐season interactions. (3) The study of movements of small‐bodied species remains a major research frontier. (4) We must increase our understanding of population connectivity. (5) With few exceptions, population regulation has barely been investigated. (6) We have increasingly integrated landscape configuration of habitats, large‐scale habitat disturbances, and habitat quality impacts into models of seasonal and overall demographic success. (7) The post‐breeding season (late summer for latitudinal migrants) is increasingly appreciated for its impacts on demography. (8) We recognize the diverse ways that avian brood parasites, nest predators, and food availability affect demography. (9) Source–sink and meta‐population models help us understand migratory avian distributions among fragmented habitats. (10) Advances in modeling have improved estimates of annual survival and fecundity, but for few species. (11) Populations can be limited by ecological conditions in winter, but habitat needs are poorly known for most species at this time. (12) Migration tends to occupy broad spatial fronts that may change seasonally or when migrants cross major barriers. (13) En route conditions can limit migrant populations; linking migration habitat quality indicators to fitness or population consequences presents a major challenge. (14) A variety of intra‐tropical Neotropical migration patterns are recognizable, but almost nothing is known about these systems beyond descriptions of a few typical species' movements. (15) Global climate change scenarios predict range and phenology shifts of Neotropical migrant bird populations that must be considered in conservation plans. Future studies will depend on new technologies and the integration of modeling with sophisticated, large‐spatial‐scale measurement and parameter estimation; whether the pace of research and management involving migratory birds can match the growth of environmental threats remains to be seen.

We have identified the gene DYN1, which encodes the heavy chain of cytoplasmic dynein in the yeast Saccharomyces cerevisiae. The predicted amino acid sequence (M(r) 471,305) reveals the presence of four P-loop motifs, as in all dyneins known so far, and has 28% overall identity to the dynein heavy chain of Dictyostelium [Koonce, M. P., Grissom, P. M. & McIntosh, J. R. (1992) J. Cell Biol. 119, 1597-1604] with 40% identity in the putative motor domain. Disruption of DYN1 causes misalignment of the spindle relative to the bud neck during cell division and results in abnormal distribution of the dividing nuclei between the mother cell and the bud. Cytoplasmic dynein, by generating force along cytoplasmic microtubules, may play an important role in the proper alignment of the mitotic spindle in yeast.

Advances in detection of genetic material from species in aquatic ecosystems, including environmental DNA (eDNA), have improved species monitoring and management. eDNA from target species can readily move in streams and rivers and the goal is to measure it, and with that infer where and how abundant species are, adding great value to delimiting species invasions, monitoring and protecting rare species, and estimating biodiversity. To date, we lack an integrated framework that identifies environmental factors that control eDNA movement in realistic, complex, and heterogeneous flowing waters. To this end, using an empirical approach and a simple conceptual model, we propose a framework of how eDNA is transported, retained, and resuspended in stream systems. Such an understanding of eDNA dispersal in streams will be essential for designing optimized sampling protocols and subsequently estimating biomass or organismal abundance. We also discuss guiding principles for more effective use of eDNA methods, highlighting the necessity of understanding these parameters for use in future predictive modeling of eDNA transport.

Difficulties in scaling up theoretical and experimental results have raised controversy over the consequences of biodiversity loss for the functioning of natural ecosystems. Using a global survey of reef fish assemblages, we show that in contrast to previous theoretical and experimental studies, ecosystem functioning (as measured by standing biomass) scales in a non-saturating manner with biodiversity (as measured by species and functional richness) in this ecosystem. Our field study also shows a significant and negative interaction between human population density and biodiversity on ecosystem functioning (i.e., for the same human density there were larger reductions in standing biomass at more diverse reefs). Human effects were found to be related to fishing, coastal development, and land use stressors, and currently affect over 75% of the world's coral reefs. Our results indicate that the consequences of biodiversity loss in coral reefs have been considerably underestimated based on existing knowledge and that reef fish assemblages, particularly the most diverse, are greatly vulnerable to the expansion and intensity of anthropogenic stressors in coastal areas.

Volcanism on Earth is known to occur in three tectonic settings: divergent plate boundaries (such as mid-ocean ridges), convergent plate boundaries (such as island arcs), and hot spots. We report volcanism on the 135 million-year-old Pacific Plate not belonging to any of these categories. Small alkalic volcanoes form from small percent melts and originate in the asthenosphere, as implied by their trace element geochemistry and noble gas isotopic compositions. We propose that these small volcanoes erupt along lithospheric fractures in response to plate flexure during subduction. Minor extents of asthenospheric melting and the volcanoes' tectonic alignment and age progression in the direction opposite to that of plate motion provide evidence for the presence of a small percent melt in the asthenosphere.