NobleBlocks

HES-SO Arc

UniversityNeuchâtel, Switzerland

Research output, citation impact, and the most-cited recent papers from HES-SO Arc (Switzerland). Aggregated across the NobleBlocks index of 300M+ scholarly works.

Total works
462
Citations
7.5K
h-index
47
i10-index
210
Also known as
HES-SO ArcHES-SO BE-JU-NEHES-SO HE ARC (Berne, Jura, Neuchâtel)

Top-cited papers from HES-SO Arc

Characterization of the dipeptide repeat protein in the molecular pathogenesis of c9FTD/ALS
Mai Yamakawa, Daisuke Ito, Takao Honda, Ken‐ichiro Kubo +3 more
2014· Human Molecular Genetics151doi:10.1093/hmg/ddu576

The expansion of the GGGGCC hexanucleotide repeat in the non-coding region of the chromosome 9 open-reading frame 72 (C9orf72) gene is the most common cause of frontotemporal dementia (FTD) and amyotrophic lateral sclerosis (ALS) (c9FTD/ALS). Recently, it was reported that an unconventional mechanism of repeat-associated non-ATG (RAN) translation arises from C9orf72 expansion. Sense and anti-sense transcripts of the expanded C9orf72 repeat, i.e. the dipeptide repeat protein (DRP) of glycine-alanine (poly-GA), glycine-proline (poly-GP), glycine-arginine (poly-GR), proline-arginine (poly-PR) and proline-alanine (poly-PA), are deposited in the brains of patients with c9FTD/ALS. However, the pathological significance of RAN-translated peptides remains unknown. We generated synthetic cDNAs encoding 100 repeats of DRP without a GGGGCC repeat and evaluated the effects of these proteins on cultured cells and cortical neurons in vivo. Our results revealed that the poly-GA protein formed highly aggregated ubiquitin/p62-positive inclusion bodies in neuronal cells. In contrast, the highly basic proteins poly-GR and PR also formed unique ubiquitin/p62-negative cytoplasmic inclusions, which co-localized with the components of RNA granules. The evaluation of cytotoxicity revealed that overexpressed poly-GA, poly-GP and poly-GR increased the substrates of the ubiquitin-proteasome system (UPS), including TDP-43, and enhanced the sensitivity to a proteasome inhibitor, indicating that these DRPs are cytotoxic, possibly via UPS dysfunction. The present data indicate that a gain-of-function mechanism of toxic DRPs possibly contributes to pathogenesis in c9FTD/ALS and that DRPs may serve as novel therapeutic targets in c9FTD/ALS.

High-accuracy absolute distance measurement using frequency comb referenced multiwavelength source
Y. Salvadé, Nicolas Schuhler, Samuel Lévêque, Sébastien Le Floch
2008· Applied Optics143doi:10.1364/ao.47.002715

We propose a new approach to multiple-wavelength interferometry, targeted to high bandwidth absolute distance measurement, with nanometer accuracy over long distances. Two cw lasers are stabilized over a wide range of frequency intervals defined by an optical frequency comb, thus offering an unprecedented large choice of synthetic wavelengths. By applying a superheterodyne detection technique, we demonstrated experimentally an accuracy of 8 nm over 800 mm for target velocities up to 50 mm/s.

Adapting to the unexpected: Problematic work situations and resilience strategies in healthcare institutions during the COVID-19 pandemic’s first wave
Typhaine M. Juvet, Sandrine Corbaz-Kurth, Pauline Roos, Lamyae Benzakour +4 more
2021· Safety Science94doi:10.1016/j.ssci.2021.105277

The COVID-19 pandemic's first wave required considerable adaptation efforts on the part of healthcare workers. The literature on resilient healthcare describes how the collective regulation strategies implemented by frontline employees make essential contributions to institutions' abilities to cope with major crises. The present mixed-methodology study was thus conducted among a large sample of employees in a variety of Swiss healthcare institutions and focused on problematic real-world situations experienced by them and their managers during the pandemic's first wave. It highlighted the anticipatory and adaptive strategies implemented by institutions, teams and individuals. The most frequently cited problematic situations involved organisational changes, interpersonal conflicts and workloads. In addition to the numerous top-down measures implemented by institutions, respondents also identified personal or team regulation strategies such as increasing staff flexibility, prioritising tasks, interprofessional collaboration, peer support or creating new communication channels to families. The present findings underlined the importance of taking greater account of healthcare support staff and strengthening managerial capacity to support interprofessional teams including those support staff.

Bipolar optical pulse coding for performance enhancement in BOTDA sensors
Marcelo A. Soto, Sébastien Le Floch, Luc Thévenaz
2013· Optics Express75doi:10.1364/oe.21.016390

A pump signal based on bipolar pulse coding and single-sideband suppressed-carried (SSB-SC) modulation is proposed for Brillouin optical time-domain analysis (BOTDA) sensors. Making a sequential use of the Brillouin gain and loss spectra, the technique is experimentally validated using bipolar complementary-correlation Golay codes along a 100 km-long fiber and 2 m spatial resolution, fully resolving a 2 m hot-spot at the end of the sensing fiber with no distortion introduced by the decoding algorithm. Experimental results, in good agreement with the theory, indicate that bipolar Golay codes provide a higher signal-to-noise ratio enhancement and stronger robustness to pump depletion in comparison to optimum unipolar pulse codes known for BOTDA sensing.

Decorating Parylene-Coated Glass with ZnO Nanoparticles for Antibacterial Applications: A Comparative Study of Sonochemical, Microwave, and Microwave-Plasma Coating Routes
Guy Applerot, R. Abu-Mukh, Alexander Irzh, Jérôme Charmet +4 more
2010· ACS Applied Materials & Interfaces64doi:10.1021/am900825h

A glass substrate, coated with a Parylene film, was coated with ZnO by three different methods: ultrasound, microwave, and microwave-plasma irradiation. These coating modes are simple, efficient, and environmentally friendly one-step processes. The structure of the coated products was characterized and compared using methods such as XRD, HR-SEM, EDS, RBS, and optical spectroscopy. Coating by ZnO nanoparticles was achieved for all three approaches. The products were found to differ in their particle sizes, coating thickness, and depth of penetration. All of the ZnO-Parylene-glass composites demonstrated a significant antibacterial activity against Escherichia coli (Gram negative) and Staphylococcus aureus (Gram positive) strains.

IoT-based dynamic street light control for smart cities use cases
Nabil Ouerhani, Nuria Pazos, Marco Aeberli, Michael Müller
201658doi:10.1109/isncc.2016.7746112

This paper presents a real-world proven solution for dynamic street light control and management which relies on an open and flexible Internet of Things architecture. Substantial contribution is brought at the interoperability level using novel device connection concept based on model-driven communication agents to speed up the integration of sensors and actuators to Internet of Things platforms. The paper shows also results from real-world tests with deployed dynamic street lights in urban spaces. The proposed dynamic light control solution permits an energy saving of about 56% compared to classical static, time-based street light control.

Biologically Derived Gels for the Cleaning of Historical and Artistic Metal Heritage
Arianna Passaretti, Luana Cuvillier, Giorgia Sciutto, Élodie Guilminot +1 more
2021· Applied Sciences56doi:10.3390/app11083405

In the general global rise of attention and research to seek greener attitudes, the field of cultural heritage (CH) makes no exception. In the last decades, an increasing number of sustainable and biologically based solutions have been proposed for the protection and care of artworks. Additionally, the safety of the target artwork and the operator must be kept as core goals. Within this scenario, new products and treatments should be explored and implemented in the common conservation praxes. Therefore, this review addressing metal heritage is aimed to report biologically derived gel formulations already proposed for this specific area as reliable tools for cleaning. Promising bio-gel-based protocols, still to be implemented in metal conservation, are also presented to promote their investigation by stakeholders in metal conservation. After an opening overview on the common practices for cleaning metallic surfaces in CH, the focus will be moved onto the potentialities of gel-alternatives and in particular of ones with a biological origin. In more detail, we displayed water-gels (i.e., hydrogels) and solvent-gels (i.e., organogels) together with particular attention to bio-solvents. The discussion is closed in light of the state-of-the-art and future perspectives.

ShARe/CLEF eHealth Evaluation Lab 2013, Task 3: Information Retrieval to Address Patients' Questions when Reading Clinical Reports
Lorraine Goeuriot, Gareth J. F. Jones, Liadh Kelly, Johannes Leveling +4 more
2013· QUT ePrints (Queensland University of Technology)55

This paper presents the results of task 3 of the ShARe/CLEF eHealth Evaluation Lab 2013. This evaluation lab focuses on improving access to medical information on the web. The task objective was to investigate the eect of using additional information such as the discharge summaries and external resources such as medical ontologies on the IR eectiveness. The participants were allowed to submit up to seven runs, one mandatory run using no additional information or external resources, and three each using or not using discharge summaries.

WebAssembly as a Common Layer for the Cloud-edge Continuum
Jämes Ménétrey, Marcelo Pasin, Pascal Felber, Valerio Schiavoni
202254doi:10.1145/3526059.3533618

Over the last decade, the cloud computing landscape has transformed from centralised architecture made of large data centres to a distributed and heterogeneous architecture embracing edge and IoT processing units. This shift has created the so-called cloud-edge continuum, which closes the gap between the large datacentres and the end-user devices. Existing solutions are, however, dominated by proprietary silos and incompatible technologies, built around dedicated devices and run-time stacks. In this position paper, we motivate the need for interoperable solutions that would run seamlessly across hardware devices and software environments, while achieving good performance and a high level of security-a critical requirement for code and data processed off-premises. We argue that the technology provided by WebAssembly running on modern virtual machines and shielded within trusted execution environments, combined with a core set of services and support libraries, allows us to meet both goals. We also present preliminary results from a prototype built with these technologies and deployed on the cloud-edge continuum.

Robustifying the Deployment of tinyML Models for Autonomous Mini-Vehicles
Miguel de Prado, Manuele Rusci, Alessandro Capotondi, Romain Donze +2 more
2021· Sensors53doi:10.3390/s21041339

Standard-sized autonomous vehicles have rapidly improved thanks to the breakthroughs of deep learning. However, scaling autonomous driving to mini-vehicles poses several challenges due to their limited on-board storage and computing capabilities. Moreover, autonomous systems lack robustness when deployed in dynamic environments where the underlying distribution is different from the distribution learned during training. To address these challenges, we propose a closed-loop learning flow for autonomous driving mini-vehicles that includes the target deployment environment in-the-loop. We leverage a family of compact and high-throughput tinyCNNs to control the mini-vehicle that learn by imitating a computer vision algorithm, i.e., the expert, in the target environment. Thus, the tinyCNNs, having only access to an on-board fast-rate linear camera, gain robustness to lighting conditions and improve over time. Moreover, we introduce an online predictor that can choose between different tinyCNN models at runtime-trading accuracy and latency-which minimises the inference's energy consumption by up to 3.2×. Finally, we leverage GAP8, a parallel ultra-low-power RISC-V-based micro-controller unit (MCU), to meet the real-time inference requirements. When running the family of tinyCNNs, our solution running on GAP8 outperforms any other implementation on the STM32L4 and NXP k64f (traditional single-core MCUs), reducing the latency by over 13× and the energy consumption by 92%.

Semantic edge computing and IoT architecture for military health services in battlefield
Dhananjay Singh, Gaurav Tripathi, Antônio Marcos Alberti, Antonio J. Jara
201751doi:10.1109/ccnc.2017.7983103

In this paper, we are visualizing a military health service (MHS) platform which is based on hierarchical IoT architecture. We propose a semantic Edge based network model which plays a significant role for communicating tactical and non-tactical piece of information over the network. Further, the exchange of information and subsequent data analysis on the MHS makes the system intelligent and smart. In any standard battlefield scenario, there is a command and control center that correlates the events happening in real time. We have made this command and control center as semantic edge component. This center is entrusted with making vital decisions on the tactical arena of the battlefield. The main aim of the proposed architecture is to provide secured zone to monitor soldiers health and their weapons conditions, respectively. We have also introduced the semantic edge computing mechanism to deal with the large amount of health data in terms of processing, storing and sharing information.

Protective multilayer packaging for long-term implantable medical devices
Andreas Hogg, Stefanie Uhl, François Feuvrier, Yann Girardet +4 more
2014· Surface and Coatings Technology48doi:10.1016/j.surfcoat.2014.02.070

State of the art packaging for implantable devices uses metal or glass housings that are reliable but limited from a miniaturisation viewpoint as well as cost-intensive. We suggest a hermetic and biocompatible thin film packaging based on alternating organic/inorganic coatings for further miniaturisation of smart implantable MEMS devices that can be applied for long-term implantation. The combination of high intrinsic molecular density silicon oxide (SiOx) and pinhole-free and stress releasing poly-para-xylylene (parylene-C) thin films creates a new composite material, which is optimal for hermetic and biocompatible packaging. A novel single-chamber thin film deposition process was developed for the fabrication of SiOx/parylene thin film multilayer structures, using a modified chemical vapour deposition (CVD) process. According to permeation and conformity aspects, the inorganic layer is the crucial layer of the coating. Permeation measurements the highly ceramic SiOx material revealed a low helium gas permeation and a non-critical cracking thickness up to 300 nm. The morphology of the multilayer structure was analysed by scanning electron microscopy; an algorithm for defining ideal layer conformity was established and no local thickness deficiencies of deposited SiOx layers could be observed. To evaluate the corrosion protection, an adapted calcium mirror test based on water droplet permeation was developed, and the water permeation of conventional parylene-C layers (4.5 μm) was compared to multilayer stacks composed of 3 SiOx interlayers (4.7 μm). In this paper, it could be shown that by tailoring the thickness ratio between the involved layers, the percolative pathway and thereby, the permeation for direct water exposure could be considerably reduced compared to conventional parylene-C single layers with the same thickness.

Bacterial iron reduction and biogenic mineral formation for the stabilisation of corroded iron objects
Wafa Kooli, Lucrezia Comensoli, Julien Maillard, Monica Albini +3 more
2018· Scientific Reports46doi:10.1038/s41598-017-19020-3

Exploiting bacterial metabolism for the stabilisation of corroded iron artefacts is a promising alternative to conventional conservation-restoration methods. Bacterial iron reduction coupled to biogenic mineral formation has been shown to promote the conversion of reactive into stable corrosion products that are integrated into the natural corrosion layer of the object. However, in order to stabilise iron corrosion, the formation of specific biogenic minerals is essential. In this study, we used the facultative anaerobe Shewanella loihica for the production of stable biogenic iron minerals under controlled chemical conditions. The biogenic formation of crystalline iron phosphates was observed after iron reduction in a solution containing Fe(III) citrate. When the same biological treatment was applied on corroded iron plates, a layer composed of iron phosphates and iron carbonates was formed. Surface and cross-section analyses demonstrated that these two stable corrosion products replaced 81% of the reactive corrosion layer after two weeks of treatment. Such results demonstrate the potential of a biological treatment in the development of a stabilisation method to preserve corroded iron objects.

Forming nanoparticles of water-soluble ionic molecules and embedding them into polymer and glass substrates
Stella Kiel, Olga Grinberg, Nina Perkas, Jérôme Charmet +2 more
2012· Beilstein Journal of Nanotechnology46doi:10.3762/bjnano.3.30

This work describes a general method for the preparation of salt nanoparticles (NPs) made from an aqueous solution of ionic compounds (NaCl, CuSO 4 and KI). These nanoparticles were created by the application of ultrasonic waves to the aqueous solutions of these salts. When the sonication was carried out in the presence of a glass microscope slide, a parylene-coated glass slide, or a silicon wafer the ionic NPs were embedded in these substrates by a one-step, ultrasound-assisted procedure. Optimization of the coating process resulted in homogeneous distributions of nanocrystals, 30 nm in size, on the surfaces of the substrates. The morphology and structure of each of the coatings were characterized by physical and chemical methods, such as X-ray diffraction (XRD), scanning electron microscopy (SEM), atomic force microscopy (AFM), Raman spectroscopy and X-ray photoelectron spectroscopy (XPS). After 24 h of leaching into water the nanoparticles of the inorganic salts were still present on the slides, and complete leaching of nanoparticles occurred only after 96 h. A mechanism of the ultrasound-assisted coating is proposed.

Div400
Bogdan Ionescu, Anca-Livia Radu, María Menéndez-Blanco, Henning Müller +2 more
201442doi:10.1145/2557642.2563670

In this paper we propose a new dataset, Div400, that was designed to support shared evaluation in different areas of social media photo retrieval, e.g., machine analysis (re-ranking, machine learning), human-based computation (crowdsourcing) or hybrid approaches (relevance feedback, machine-crowd integration). Div400 comes with associated relevance and diversity assessments performed by human annotators. 396 landmark locations are represented via 43,418 Flickr photos and metadata, Wikipedia pages and content descriptors for text and visual modalities. To facilitate distribution, only Creative Commons content was included in the dataset. The proposed dataset was validated during the 2013 Retrieving Diverse Social Images Task at the MediaEval Benchmarking Initiative for Multimedia Evaluation.

Comparison of the environmental assessment of an identical office building with national methods
Rolf Frischknecht, Harpa Birgisdóttir, C-U Chae, Thomas Lützkendorf +4 more
2019· IOP Conference Series Earth and Environmental Science37doi:10.1088/1755-1315/323/1/012037

Abstract The IEA EBC Annex 72 focuses on the assessment of the primary energy demand, greenhouse gas emissions and environmental impacts of buildings during production, construction, use (including repair and replacement) and end of life (dismantling), i.e. during the entire life cycle of buildings. In one of its activities, reference buildings (size, materialisation, operational energy demand, etc.) were defined on which the existing national assessment methods are applied using national (if available) databases and (national/regional) approaches. The “be2226” office building in Lustenau, Austria was selected as one of the reference buildings. TU Graz established a BIM model and quantified the amount of building elements as well as construction materials required and the operational energy demand. The building assessment was carried out using the same material and energy demand but applying the LCA approach used in the different countries represented by the participating Annex experts. The results of these assessments are compared in view of identifying major discrepancies. Preliminary findings show that the greenhouse gas emissions per kg of building material differ up to a factor of two and more. Major differences in the building assessments are observed in the transports to the construction site (imports) and the construction activities as well as in the greenhouse gas emissions of the operational energy demand (electricity). The experts document their practical difficulties and how they overcame them. The results of this activity are used to better target harmonisation efforts.

Ultra-thin layer packaging for implantable electronic devices
Andreas Hogg, Thierry Aellen, Stefanie Uhl, Benjamin Graf +3 more
2013· Journal of Micromechanics and Microengineering36doi:10.1088/0960-1317/23/7/075001

State of the art packaging for long-term implantable electronic devices generally uses reliable metal and glass housings; however, these are limited in the miniaturization potential and cost reduction. This paper focuses on the development of biocompatible hermetic thin-film packaging based on poly-para-xylylene (Parylene-C) and silicon oxide (SiOx) multilayers for smart implantable microelectromechanical systems (MEMS) devices. For the fabrication, a combined Parylene/SiOx single-chamber deposition system was developed. Topological aspects of multilayers were characterized by atomic force microscopy and scanning electron microscopy. Material compositions and layer interfaces were analyzed by Fourier transform infrared spectrometry and x-ray photoelectron spectroscopy. To evaluate the multilayer corrosion protection, water vapor permeation was investigated using a calcium mirror test. The calcium mirror test shows very low water permeation rates of 2 × 10−3 g m−2 day−1 (23 °C, 45% RH) for a 4.7 µm multilayer, which is equivalent to a 1.9 mm pure Parylene-C coating. According to the packaging standard MIL-STD-883, the helium gas tightness was investigated. These helium permeation measurements predict that a multilayer of 10 µm achieves the hermeticity acceptance criterion required for long-term implantable medical devices.

Use of Bacteria To Stabilize Archaeological Iron
Lucrezia Comensoli, Julien Maillard, Monica Albini, Frederic Sandoz +2 more
2017· Applied and Environmental Microbiology34doi:10.1128/aem.03478-16

ABSTRACT Iron artifacts are common among the findings of archaeological excavations. The corrosion layer formed on these objects requires stabilization after their recovery, without which the destruction of the item due to physicochemical damage is likely. Current technologies for stabilizing the corrosion layer are lengthy and generate hazardous waste products. Therefore, there is a pressing need for an alternative method for stabilizing the corrosion layer on iron objects. The aim of this study was to evaluate an alternative conservation-restoration method using bacteria. For this, anaerobic iron reduction leading to the formation of stable iron minerals in the presence of chlorine was investigated for two strains of Desulfitobacterium hafniense (strains TCE1 and LBE). Iron reduction was observed for soluble Fe(III) phases as well as for akaganeite, the most troublesome iron compound in the corrosion layer of archaeological iron objects. In terms of biogenic mineral production, differential efficiencies were observed in assays performed on corroded iron coupons. Strain TCE1 produced a homogeneous layer of vivianite covering 80% of the corroded surface, while on the coupons treated with strain LBE, only 10% of the surface was covered by the same mineral. Finally, an attempt to reduce iron on archaeological objects was performed with strain TCE1, which led to the formation of both biogenic vivianite and magnetite on the surface of the artifacts. These results demonstrate the potential of this biological treatment for stabilizing archaeological iron as a promising alternative to traditional conservation-restoration methods. IMPORTANCE Since the Iron Age, iron has been a fundamental material for the building of objects used in everyday life. However, due to its reactivity, iron can be easily corroded, and the physical stability of the object built is at risk. This is particularly true for archaeological objects on which a potentially unstable corrosion layer is formed during the time the object is buried. After excavation, changes in environmental conditions (e.g., higher oxygen concentration or lower humidity) alter the stability of the corrosion layer and can lead to the total destruction of the object. In this study, we demonstrate the feasibility of an innovative treatment based on bacterial iron reduction and biogenic mineral formation to stabilize the corrosion layer and protect these objects.

Optimizing Parylene C Adhesion for MEMS Processes: Potassium Hydroxide Wet Etching
Jérôme Charmet, Joanna Bitterli, O. Sereda, Martha Liley +2 more
2013· Journal of Microelectromechanical Systems34doi:10.1109/jmems.2013.2248126

Parylenes are used for a wide range of applications in microelectromechanical systems (MEMS) devices. However, their poor adhesion in a harsh liquid environment can limit the fabrication processes of complex MEMS and bioMEMS devices. Potassium hydroxide (KOH) wet etching is particularly challenging and was used to evaluate the adhesion of Parylene C on silicon, silicon nitride, and silicon dioxide substrates. Using a number of characterization procedures, this paper shows that the delamination is the result of liquid penetrating both at the Parylene-substrate interface and through the polymer layer. The combination of an adhesion promoter and a thermal treatment improves the adhesion of the layer. The treatment is evaluated in two case studies, where the Parylene is used as: 1) a biocompatible coating, and 2) as a mask to block the entrance of a microfluidics channel. In the first case, it is shown that the treatments, including the KOH exposure, do not influence the growth and proliferation of SaOS-2 cells, as compared to a generic Parylene layer. In the second case, the results show that Parylene can be used efficiently to block the entrance of the channel, and that it can be removed afterward.

Integrating Weakly Supervised Word Sense Disambiguation into Neural Machine Translation
Xiao Pu, Nikolaos Pappas, James Henderson, Andréi Popescu-Belis
2018· Transactions of the Association for Computational Linguistics33doi:10.1162/tacl_a_00242

This paper demonstrates that word sense disambiguation (WSD) can improve neural machine translation (NMT) by widening the source context considered when modeling the senses of potentially ambiguous words. We first introduce three adaptive clustering algorithms for WSD, based on k-means, Chinese restaurant processes, and random walks, which are then applied to large word contexts represented in a low-rank space and evaluated on SemEval shared-task data. We then learn word vectors jointly with sense vectors defined by our best WSD method, within a state-of-the-art NMT system. We show that the concatenation of these vectors, and the use of a sense selection mechanism based on the weighted average of sense vectors, outperforms several baselines including sense-aware ones. This is demonstrated by translation on five language pairs. The improvements are more than 1 BLEU point over strong NMT baselines, +4% accuracy over all ambiguous nouns and verbs, or +20% when scored manually over several challenging words.