Karelian Research Centre

Advances in the phenology of organisms are often attributed to climate change, but alternatively, may reflect a publication bias towards advances and may be caused by environmental factors unrelated to climate change. Both factors are investigated using the breeding dates of 25 long-term studied populations of Ficedula flycatchers across Europe. Trends in spring temperature varied markedly between study sites, and across populations the advancement of laying date was stronger in areas where the spring temperatures increased more, giving support to the theory that climate change causally affects breeding date advancement.

Abstract Aim The EUNIS Habitat Classification is a widely used reference framework for European habitat types (habitats), but it lacks formal definitions of individual habitats that would enable their unequivocal identification. Our goal was to develop a tool for assigning vegetation‐plot records to the habitats of the EUNIS system, use it to classify a European vegetation‐plot database, and compile statistically‐derived characteristic species combinations and distribution maps for these habitats. Location Europe. Methods We developed the classification expert system EUNIS‐ESy, which contains definitions of individual EUNIS habitats based on their species composition and geographic location. Each habitat was formally defined as a formula in a computer language combining algebraic and set‐theoretic concepts with formal logical operators. We applied this expert system to classify 1,261,373 vegetation plots from the European Vegetation Archive (EVA) and other databases. Then we determined diagnostic, constant and dominant species for each habitat by calculating species‐to‐habitat fidelity and constancy (occurrence frequency) in the classified data set. Finally, we mapped the plot locations for each habitat. Results Formal definitions were developed for 199 habitats at Level 3 of the EUNIS hierarchy, including 25 coastal, 18 wetland, 55 grassland, 43 shrubland, 46 forest and 12 man‐made habitats. The expert system classified 1,125,121 vegetation plots to these habitat groups and 73,188 to other habitats, while 63,064 plots remained unclassified or were classified to more than one habitat. Data on each habitat were summarized in factsheets containing habitat description, distribution map, corresponding syntaxa and characteristic species combination. Conclusions EUNIS habitats were characterized for the first time in terms of their species composition and distribution, based on a classification of a European database of vegetation plots using the newly developed electronic expert system EUNIS‐ESy. The data provided and the expert system have considerable potential for future use in European nature conservation planning, monitoring and assessment.

Silver birch (Betula pendula) is a pioneer boreal tree that can be induced to flower within 1 year. Its rapid life cycle, small (440-Mb) genome, and advanced germplasm resources make birch an attractive model for forest biotechnology. We assembled and chromosomally anchored the nuclear genome of an inbred B. pendula individual. Gene duplicates from the paleohexaploid event were enriched for transcriptional regulation, whereas tandem duplicates were overrepresented by environmental responses. Population resequencing of 80 individuals showed effective population size crashes at major points of climatic upheaval. Selective sweeps were enriched among polyploid duplicates encoding key developmental and physiological triggering functions, suggesting that local adaptation has tuned the timing of and cross-talk between fundamental plant processes. Variation around the tightly-linked light response genes PHYC and FRS10 correlated with latitude and longitude and temperature, and with precipitation for PHYC. Similar associations characterized the growth-promoting cytokinin response regulator ARR1, and the wood development genes KAK and MED5A.

<ja:p>In the European part of the Russian boreal zone the dynamics of pristine forests (taiga) has been studied by several generations of researchers. Many studies have examined the patterns and role of fire, windthrow, insect outbreaks and other natural disturbances. An attempt is made to provide a brief review of these studies. The reviewed studies show that lightning strikes were the only natural source of fires in taiga. The frequency of fires varied in various types of pristine landscape from 1–2 per century to 1–2 per millennium. Fires maintained a dynamic equilibrium between compositionally different forest communities or their certain ratio and areal occurrence. Fires favored the regeneration and recovery of pine forests and prevented the replacement of shade-intolerant species (e.g. pine) by shade-tolerant ones (e.g. spruce). Taiga forests generally displayed a mosaic pattern that varied from pioneer plant communities, growing in open burns, to climax communities that were extremely seldom affected by fire. The reviewed studies suggest that fires were a powerful ecological factor in pristine taiga, being largely responsible for the structure and spontaneous dynamics of forest communities. Windfalls were also common in pristine taiga landscapes and they regulated spontaneous dynamics in a gap-mosaic regime, which is most characteristic of spruce forests.</ja:p>

Sixty-four samples from 46 salmon populations totalling 2369 specimens were used for polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) analysis of the mitochondrial ND1 region. The final analyses included 3095 specimens from 60 populations in Northern Europe. A subsample was analysed by RFLP of ND3/4/5/6. Representative RFLP haplotypes from different parts of the distribution area were sequenced and the phylogeny of European haplotypes and their relations to the North American lineage was described. The four common European haplotypes derive from the ancestral ND1-BBBA (rooting the European clade to the North American) by one-step substitutions: AAAA < AABA < BBBA > BBBB. The Swedish west-coast populations differ from the geographically close southern Baltic, indicating absence of inward and limited outward gene flow through the Danish straits during the last 8000 years. Within the Baltic Sea, only three ND1 haplotypes were detected and there was no variation for ND3/4/5/6. In the whole southern Baltic and in lakes Vänern, Ladoga and Onega the haplotype AABA dominated. Proposed postglacial colonization routes to the Baltic Sea are discussed in relation to the haplotype distribution pattern.

Disturbance regimes are changing in forests across the world in response to global climate change. Despite the profound impacts of disturbances on ecosystem services and biodiversity, assessments of disturbances at the global scale remain scarce. Here, we analyzed natural disturbances in boreal and temperate forest ecosystems for the period 2001–2014, aiming to 1) quantify their within‐ and between‐biome variation and 2) compare the climate sensitivity of disturbances across biomes. We studied 103 unmanaged forest landscapes with a total land area of 28.2 × 10 6 ha, distributed across five continents. A consistent and comprehensive quantification of disturbances was derived by combining satellite‐based disturbance maps with local expert knowledge of disturbance agents. We used Gaussian finite mixture models to identify clusters of landscapes with similar disturbance activity as indicated by the percent forest area disturbed as well as the size, edge density and perimeter–area‐ratio of disturbed patches. The climate sensitivity of disturbances was analyzed using Bayesian generalized linear mixed effect models and a globally consistent climate dataset. Within‐biome variation in natural disturbances was high in both boreal and temperate biomes, and disturbance patterns did not vary systematically with latitude or biome. The emergent clusters of disturbance activity in the boreal zone were similar to those in the temperate zone, but boreal landscapes were more likely to experience high disturbance activity than their temperate counterparts. Across both biomes high disturbance activity was particularly associated with wildfire, and was consistently linked to years with warmer and drier than average conditions. Natural disturbances are a key driver of variability in boreal and temperate forest ecosystems, with high similarity in the disturbance patterns between both biomes. The universally high climate sensitivity of disturbances across boreal and temperate ecosystems indicates that future climate change could substantially increase disturbance activity.

The study aimed at identifying and quantifying determinants of low birth weight (LBW) by following a community based prospective cohort of pregnant women in 45 villages in Pune district. In the 1922 live births born to mothers without a chronic illness, in whom birth weight was available within 24 hours, the cumulative incidence of LBW (< 2500 g) was 29%. The unadjusted relative risks for LBW were significantly higher for lower socio-economic status (RR = 1.71), maternal age less than 20 years (RR = 1.27), primiparity (RR = 1.32), last pregnancy interval less than 6 months (RR = 1.48), non-pregnant weight less than 40 kg (RR = 1.3), height below 145 cm (RR = 1.51), hemoglobin less than 9 g/dl (RR = 1.53) and third trimester bleeding (RR = 1.87). Multivariate logistic regression analysis showed that the adjusted odds ratio for LBW decreased with increasing gestational duration, non-pregnant weight, parity and rising education level of the mother. Socio-economic status, non-pregnant weight, maternal height, and severe anemia in pregnancy had substantial attributable risk per cent for LBW (41.4%, 22.9%, 29.5% and 34.5%, respectively). The findings suggest that selectively targetted interventions such as improving maternal education and nutrition, specifically anemia, wider availability of contraception to delay the first pregnancy and to increase pregnancy intervals may help in identifying and ensuring adequate care for those women at greatest risk of LBW.

Major changes in atmospheric and ocean chemistry occurred in the Paleoproterozoic era (2.5 to 1.6 billion years ago). Increasing oxidation dramatically changed Earth's surface, but few quantitative constraints exist on this important transition. This study describes the sedimentology, mineralogy, and geochemistry of a 2-billion-year-old, ~800-meter-thick evaporite succession from the Onega Basin in Russian Karelia. The deposit consists of a basal unit dominated by halite (~100 meters) followed by units dominated by anhydrite-magnesite (~500 meters) and dolomite-magnesite (~200 meters). The evaporite minerals robustly constrain marine sulfate concentrations to at least 10 millimoles per kilogram of water, representing an oxidant reservoir equivalent to more than 20% of the modern ocean-atmosphere oxidizing capacity. These results show that substantial amounts of surface oxidant accumulated during this critical transition in Earth's oxygenation.

Five regionally significant Weichselian glacial events, each separated by terrestrial and marine interstadial conditions, are described from northwestern Russia. The first glacial event took place in the Early Weichselian. An ice sheet centred in the Kara Sea area dammed up a large lake in the Pechora lowland. Water was discharged across a threshold on the Timan Ridge and via an ice‐free corridor between the Scandinavian Ice Sheet and the Kara Sea Ice Sheet to the west and north into the Barents Sea. The next glaciation occurred around 75–70 kyr BP after an interstadial episode that lasted c. 15 kyr. A local ice cap developed over the Timan Ridge at the transition to the Middle Weichselian. Shortly after deglaciation of the Timan ice cap, an ice sheet centred in the Barents Sea reached the area. The configuration of this ice sheet suggests that it was confluent with the Scandinavian Ice Sheet. Consequently, around 70–65 kyr BP a huge ice‐dammed lake formed in the White Sea basin (the ‘White Sea Lake’), only now the outlet across the Timan Ridge discharged water eastward into the Pechora area. The Barents Sea Ice Sheet likely suffered marine down‐draw that led to its rapid collapse. The White Sea Lake drained into the Barents Sea, and marine inundation and interstadial conditions followed between 65 and 55 kyr BP. The glaciation that followed was centred in the Kara Sea area around 55–45 kyr BP. Northward directed fluvial runoff in the Arkhangelsk region indicates that the Kara Sea Ice Sheet was independent of the Scandinavian Ice Sheet and that the Barents Sea remained ice free. This glaciation was succeeded by a c. 20‐kyr‐long ice‐free and periglacial period before the Scandinavian Ice Sheet invaded from the west, and joined with the Barents Sea Ice Sheet in the northernmost areas of northwestern Russia. The study area seems to be the only region that was invaded by all three ice sheets during the Weichselian. A general increase in ice‐sheet size and the westwards migrating ice‐sheet dominance with time was reversed in Middle Weichselian time to an easterly dominated ice‐sheet configuration. This sequence of events resulted in a complex lake history with spillways being re‐used and ice‐dammed lakes appearing at different places along the ice margins at different times.

The increasing trend of large carnivore attacks on humans not only raises human safety concerns but may also undermine large carnivore conservation efforts. Although rare, attacks by brown bears Ursus arctos are also on the rise and, although several studies have addressed this issue at local scales, information is lacking on a worldwide scale. Here, we investigated brown bear attacks (n = 664) on humans between 2000 and 2015 across most of the range inhabited by the species: North America (n = 183), Europe (n = 291), and East (n = 190). When the attacks occurred, half of the people were engaged in leisure activities and the main scenario was an encounter with a female with cubs. Attacks have increased significantly over time and were more frequent at high bear and low human population densities. There was no significant difference in the number of attacks between continents or between countries with different hunting practices. Understanding global patterns of bear attacks can help reduce dangerous encounters and, consequently, is crucial for informing wildlife managers and the public about appropriate measures to reduce this kind of conflicts in bear country.

Pentti Hölttä, Victor Balagansky, Adam A. Garde, Satu Mertanen, Petri Peltonen, Alexander Slabunov, Peter Sorjonen-Ward, Martin Whitehouse. Episodes 2008;31:13-9. https://doi.org/10.18814/epiiugs/2008/v31i1/003

Natural killer cells (NK cells) play an important role in innate immunity. NK cells recognize self and nonself depending on the balance of activating receptors and inhibitory receptors. After binding to their ligands, NK cell receptors trigger subsequent signaling conduction and then determine whether NK is activated or inhibited. Furthermore, NK cell response includes cytotoxicity and cytokine release, which is tightly related to the activation of NK cell-activating receptors and the inhibition of inhibitory receptors on the surfaces of NK cells. The expression and function of NK cell surface receptors also alter in virus infection, tumor, and autoimmune diseases and influence the occurrence and development of diseases. So, it is important to understand the mechanism of recognition between NK receptors and their ligands in pathological conditions and the signaling pathways of NK cell receptors. This review mainly summarizes the research progress on NK cell surface receptors and their signal pathways.

The number of postsecondary students with learning disabilities has increased dramatically over the last several years. This increase, coupled with federal legislation mandating "academic adjustments" for students with disabilities, has prompted the development of postsecondary learning disability support service programs. One support service that has begun to attract considerable attention is assistive technology. The purpose of this article is to provide an overview of assistive technology as it relates to postsecondary students with learning disabilities by (a) briefly tracing the development of assistive technology service for postsecondary students with learning disabilities; (b) identifying basic models of assistive technology service delivery and specific services; (c) providing a description of specific assistive technologies; (d) reviewing research on the effectiveness of assistive technology with postsecondary students with learning disabilities, with a focus on the authors' 3-year federally funded study; and (e) concluding with a summary and recommendations.

Analysis of 3.3 Ga tonalite–trondhjemite–granodiorite (TTG) series granitoids and greenstone belt assemblages from the Bundelkhand craton in central India reveal that it is a typical Archaean craton. At least two greenstone complexes can be recognized in the Bundelkhand craton, namely the (i) Central Bundelkhand (Babina, Mauranipur belts) and (ii) Southern Bundelkhand (Girar, Madaura belts). The Central Bundelkhand greenstone complex contains three tectonostratigraphic assemblages: (1) metamorphosed basic or metabasic, high-Mg rocks; (2) banded iron formations (BIFs); and (3) felsic volcanics. The first two assemblages are regarded as representing an earlier sequence, which is in tectonic contact with the felsic volcanics. However, the contact between the BIFs and mafic volcanics is also evidently tectonic. Metabasic high-Mg rocks are represented by amphibolites and tremolite-actinolite schists in the Babina greenstone belt and are comparable in composition to tholeiitic basalts-basaltic andesites and komatiites. They are very similar to the metabasic high-Mg rocks of the Mauranipur greenstone belt. Felsic volcanics occur as fine-grained schists with phenocrysts of quartz, albite, and microcline. Felsic volcanics are classified as calc-alkaline dacites, less commonly rhyolites. The chondrite-normalized rare earth element distribution pattern is poorly fractionated (LaN/LuN = 11–16) with a small negative Eu anomaly (Eu/Eu* = 0.68–0.85), being characteristic of volcanics formed in a subduction setting. On Rb – Y + Nb, Nb – Y, Rb – Ta + Yb and Ta – Yb discrimination diagrams, the compositions of the volcanics are also consistent with those of felsic rocks formed in subduction settings. SHRIMP-dating of zircon from the felsic volcanics of the Babina belt of the Central Bundelkhand greenstone complex, performed for the first time, has shown that they were erupted in Neoarchaean time (2542 ± 17 Ma). The early sequence of the Babina belt is correlatable with the rocks of the Mauranipur belt, whose age is tentatively estimated as Mesoarchaean. The Central Bundelkhand greenstone complex consists of two (Meso- and Neoarchaean) sequences, which were formed in subduction settings.

The nanosized water phase has been discovered while studying differential scanning calorimetry (DSC) of the aqueous gel of nano-diamond particles (diameter ca. 5 nm). Two endothermic peaks were observed in the DSC traces of frozen gel upon warming; a broad peak appeared at 265 K before the melting of bulk water, which is attributed to the melting of nanophase water adsorbed onto the surface of nano-diamond particles. The events can be reproduced in exothermic fashion upon cooling the same sample. The mass of nanophase water per one nano-diamond particle and the melting enthalpy of nanophase water were derived from the DSC data. Similar nanophase water was observed earlier in gels prepared from an aqueous dispersion of C60 clusters with an average diameter of 68 nm, but the effect was not as distinct as with nano-diamond particles. These results demonstrate that DSC could be a versatile tool to study the stability of carbon nanoparticles in liquid media.

The pied flycatcher is one of the most phenotypically variable bird species in Europe. The geographic variation in phenotypes has often been attributed to spatial variation in selection regimes that is associated with the presence or absence of the congeneric collared flycatcher. Spatial variation in phenotypes could however also be generated by spatially restricted gene flow and genetic drift. We examined the genetic population structure of pied flycatchers across the breeding range and applied the phenotypic Q(ST) (P(ST))-F(ST) approach to detect indirect signals of divergent selection on dorsal plumage colouration in pied flycatcher males. Allelic frequencies at neutral markers were found to significantly differ among populations breeding in central and southern Europe whereas northerly breeding pied flycatchers were found to be one apparently panmictic group of individuals. Pairwise differences between phenotypic (P(ST)) and neutral genetic distances (F(ST)) were positively correlated after removing the most differentiated Spanish and Swiss populations from the analysis, suggesting that genetic drift may have contributed to the observed phenotypic differentiation in some parts of the pied flycatcher breeding range. Differentiation in dorsal plumage colouration however greatly exceeded that observed at neutral genetic markers, which indicates that the observed pattern of phenotypic differentiation is unlikely to be solely maintained by restricted gene flow and genetic drift.

In stark contrast to other species within the Salmonidae family, phylogeographic information on European grayling, Thymallus thymallus, is virtually nonexistent. In this paper, we utilized mitochondrial DNA polymerase chain reaction-restriction fragment length polymorphism (mtDNA PCR-RFLP) and sequence variation to infer the postglacial dispersal routes of T. thymallus into and within northern Europe, and to locate geographically, potential evolutionarily distinct populations. Mitochondrial analyses revealed a total of 27 T. thymallus haplotypes which clustered into three distinct lineages. Average pairwise interlineage divergence was four and nine times higher than average intralineage divergence for RFLP and sequence data, respectively. Two European grayling individuals from the easternmost sample in Russia exhibited haplotypes more genetically diverged from any T. thymallus haplotype than T. arcticus haplotype, and suggested that hybridization/introgression zone of these two sister species may extend much further west than previously thought. Geographic division of the lineages was generally very clear with northern Europe comprising of two genetically differentiated areas: (i) Finland, Estonia and north-western Russia; and (ii) central Germany, Poland and western Fennoscandia. Average interpopulation divergence in North European T. thymallus was 10 times higher than that observed in a recent mtDNA study of North American T. arcticus. We conclude that (i) North European T. thymallus populations have survived dramatic Pleistocene temperature oscillations and originate from ancient eastern and central European refugia; (ii) genetic divergence of population groups within northern Europe is substantial and geographically distinct; and (iii) the remainder of Europe harbours additional differentiated assemblages that likely descend from a Danubian refugium. These findings should provide useful information for developing appropriate conservation strategies for European grayling and exemplify a case with a clear need for multinational co-operation for managing and conserving biodiversity.

In this article the distribution and intensity of cross-border cooperation (CBC) networks are tested with primary survey and interview data collected from the Finnish–Russian cross-border region. The study concentrates on the cross-border connectivity of three regionally significant and interlocking sectors (forest, mining and tourism industries together with associated research and administrative organisations) with varying strategies towards natural resource use. The collected data were examined by applying social network analysis tools developed for cross-border contexts. The results depict varying landscapes of CBC depending on the type (firms, research and administrative organisations) of the surveyed actors. Overall the studied CBC network is weakly developed with low firm-level participation and low integration between the sectors – a weakness in the sustainable utilisation of natural resources. Local administrative and research organisations are the network hubs in the studied cross-border region. As apositive note, the CBC network is not solely reliant on these few network hubs but also consists of several moderately connected cross-border actors that increase its robustness against cross-border network failures. The emergence of new and the deepening of the existing cross-border links between the industries would be pivotal for good policy design regarding local land-use and natural resource use policies.Abbreviations: CBC: Cross-border cooperation; CBR: Cross-border region; NGO: Non-governmental organisation; SNA: Social network analysis

The programmed death (PD)-1/PD-ligand (PD-L) pathway and regulatory T cells (Tregs) are essential for the maintenance of immune tolerance. Their activation in the tumour microenvironment contributes to the evasion of the transformed cells from the immune surveillance and the suppression of an antitumour immune response. Therefore, PD-1/PD-L1 and Tregs are important targets for cancer immunotherapy. Our review focuses on the current role of the PD-1/PD-L1 axis in Treg development and function in the tumour microenvironment. We also discuss combination therapy with PD-1/PD-L1 inhibitors and Treg-modulating agents affecting the adenosinergic pathway, TGF-β signalling, immune checkpoints and other approaches to downregulation of Tregs.

The immunosuppressive effect of adenosine in the microenvironment of a tumor is well established. Presently, researchers are developing approaches in immune therapy that target inhibition of adenosine or its signaling such as CD39 or CD73 inhibiting antibodies or adenosine A2A receptor antagonists. However, numerous enzymatic pathways that control ATP-adenosine balance, as well as understudied intracellular adenosine regulation, can prevent successful immunotherapy. This review contains the latest data on two adenosine-lowering enzymes: adenosine kinase (ADK) and adenosine deaminase (ADA). ADK deletes adenosine by its phosphorylation into 5'-adenosine monophosphate. Recent studies have revealed an association between a long nuclear ADK isoform and an increase in global DNA methylation, which explains epigenetic receptor-independent role of adenosine. ADA regulates the level of adenosine by converting it to inosine. The changes in the activity of ADA are detected in patients with various cancer types. The article focuses on the biological significance of these enzymes and their roles in the development of cancer. Perspectives of future studies on these enzymes in therapy for cancer are discussed.