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Takuvik Joint International Laboratory

facilityQuébec, Quebec, Canada

Research output, citation impact, and the most-cited recent papers from Takuvik Joint International Laboratory (Canada). Aggregated across the NobleBlocks index of 300M+ scholarly works.

Total works
171
Citations
8.7K
h-index
47
i10-index
144
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TakuvikTakuvik Joint International Laboratory

Top-cited papers from Takuvik Joint International Laboratory

A review of air–ice chemical and physical interactions (AICI): liquids, quasi-liquids, and solids in snow
Thorsten Bartels‐Rausch, Hans‐Werner Jacobi, Tara F. Kahan, Jennie L. Thomas +4 more
2014· Atmospheric chemistry and physics302doi:10.5194/acp-14-1587-2014

Abstract. Snow in the environment acts as a host to rich chemistry and provides a matrix for physical exchange of contaminants within the ecosystem. The goal of this review is to summarise the current state of knowledge of physical processes and chemical reactivity in surface snow with relevance to polar regions. It focuses on a description of impurities in distinct compartments present in surface snow, such as snow crystals, grain boundaries, crystal surfaces, and liquid parts. It emphasises the microscopic description of the ice surface and its link with the environment. Distinct differences between the disordered air–ice interface, often termed quasi-liquid layer, and a liquid phase are highlighted. The reactivity in these different compartments of surface snow is discussed using many experimental studies, simulations, and selected snow models from the molecular to the macro-scale. Although new experimental techniques have extended our knowledge of the surface properties of ice and their impact on some single reactions and processes, others occurring on, at or within snow grains remain unquantified. The presence of liquid or liquid-like compartments either due to the formation of brine or disorder at surfaces of snow crystals below the freezing point may strongly modify reaction rates. Therefore, future experiments should include a detailed characterisation of the surface properties of the ice matrices. A further point that remains largely unresolved is the distribution of impurities between the different domains of the condensed phase inside the snowpack, i.e. in the bulk solid, in liquid at the surface or trapped in confined pockets within or between grains, or at the surface. While surface-sensitive laboratory techniques may in the future help to resolve this point for equilibrium conditions, additional uncertainty for the environmental snowpack may be caused by the highly dynamic nature of the snowpack due to the fast metamorphism occurring under certain environmental conditions. Due to these gaps in knowledge the first snow chemistry models have attempted to reproduce certain processes like the long-term incorporation of volatile compounds in snow and firn or the release of reactive species from the snowpack. Although so far none of the models offers a coupled approach of physical and chemical processes or a detailed representation of the different compartments, they have successfully been used to reproduce some field experiments. A fully coupled snow chemistry and physics model remains to be developed.

Variability in particle attenuation and chlorophyll fluorescence in the tropical Pacific: Scales, patterns, and biogeochemical implications
Hervé Claustre, André Morel, Marcel Babin, Caroline Cailliau +4 more
1999· Journal of Geophysical Research Atmospheres162doi:10.1029/98jc01334

The variability in particle attenuation ( c p ) and in chlorophyll in situ fluorescence ( F is ) was examined in November 1994 along 150°W in the Pacific Ocean. Two main sources of variation in c p and F is profiles are identified by analyzing data from a 16°S–1°N transect, and from two 5 day stations (5°S and 16°S). The first source reflects changes in the trophic status resulting from prevailing hydrodynamical regimes at large scales. By using flow cytometric data and some assumptions about the size distribution of the different biological stocks, a decomposition of c p into its vegetal ( c veg ) and nonvegetal ( c nveg ) components is attempted. Within the euphotic layer, c veg accounts for 43% of the total c p signal at the equator and for only 20% in the South Pacific gyre. The nonvegetal component is then subdivided into heterotrophic organisms and detritus contributions. The detrital material is an important contributor with 43% of c p at 5°S and 55% at 16°S. A further decomposition of F is and c veg into the three dominant phytoplanktonic groups ( Prochlorococcus, Synechococcus , and picoeucaryotes) confirms that picoeucaryotes are important contributors of the vegetal biomass, especially within and below the deep chlorophyll maximum (DCM) (>50% of the algal stock) at 16°S. The second, and essentially local, source of variation is related to specific rhythms in biological and physiological processes. The prominent signals detected during the time series occur at the daily scale: besides the pronounced fluorescence depression at noon in upper layers, particle attenuation in all the layers examined and fluorescence in the DCM display conspicuous daily oscillations. They result from the balance between daytime accumulation and night removal of particles, of algal cells in particular. Finally, the estimation of c p ‐based growth rates points out the surprisingly rapid turnover time of the whole particulate matter stock in oligotrophic waters (16°S), not only in the euphotic zone (0.63 d −1 ) but also within the dimly lit layers of the DCM (0.36 d −1 ). The corresponding growth rate at 5°S, within a quasi‐mesotrophic regime, is 0.47 d −1 within the euphotic zone.

Sea-surface dimethylsulfide (DMS) concentration from satellite data at global and regional scales
Martí Galí, Maurice Levasseur, Emmanuel Devred, Rafel Simó +1 more
2018· Biogeosciences146doi:10.5194/bg-15-3497-2018

Abstract. The marine biogenic gas dimethylsulfide (DMS) modulates climate by enhancing aerosol light scattering and seeding cloud formation. However, the lack of time- and space-resolved estimates of DMS concentration and emission hampers the assessment of its climatic effects. Here we present DMSSAT, a new remote sensing algorithm that relies on macroecological relationships between DMS, its phytoplanktonic precursor dimethylsulfoniopropionate (DMSPt) and plankton light exposure. In the first step, planktonic DMSPt is estimated from satellite-retrieved chlorophyll a and the light penetration regime as described in a previous study (Galí et al., 2015). In the second step, DMS is estimated as a function of DMSPt and photosynthetically available radiation (PAR) at the sea surface with an equation of the form: log10DMS=α+βlog10DMSPt+γPAR. The two-step DMSSAT algorithm is computationally light and can be optimized for global and regional scales. Validation at the global scale indicates that DMSSAT has better skill than previous algorithms and reproduces the main climatological features of DMS seasonality across contrasting biomes. The main shortcomings of the global-scale optimized algorithm are related to (i) regional biases in remotely sensed chlorophyll (which cause underestimation of DMS in the Southern Ocean) and (ii) the inability to reproduce high DMS ∕ DMSPt ratios in late summer and fall in specific regions (which suggests the need to account for additional DMS drivers). Our work also highlights the shortcomings of interpolated DMS climatologies, caused by sparse and biased in situ sampling. Time series derived from MODIS-Aqua in the subpolar North Atlantic between 2003 and 2016 show wide interannual variability in the magnitude and timing of the annual DMS peak(s), demonstrating the need to move beyond the classical climatological view. By providing synoptic time series of DMS emission, DMSSAT can leverage atmospheric chemistry and climate models and advance our understanding of plankton–aerosol–cloud interactions in the context of global change.

Seasonal evolution of the effective thermal conductivity of the snow and thesoil in high Arctic herb tundra at Bylot Island, Canada
Florent Dominé, Mathieu Barrere, Denis Sarrazin
2016· ˜The œcryosphere128doi:10.5194/tc-10-2573-2016

Abstract. The values of the snow and soil thermal conductivity, ksnow and ksoil, strongly impact the thermal regime of the ground in the Arctic, but very few data are available to test model predictions for these variables. We have monitored ksnow and ksoil using heated needle probes at Bylot Island in the Canadian High Arctic (73° N, 80° W) between July 2013 and July 2015. Few ksnow data were obtained during the 2013–2014 winter, because little snow was present. During the 2014–2015 winter ksnow monitoring at 2, 12 and 22 cm heights and field observations show that a depth hoar layer with ksnow around 0.02 W m−1 K−1 rapidly formed. At 12 and 22 cm, wind slabs with ksnow around 0.2 to 0.3 W m−1 K−1 formed. The monitoring of ksoil at 10 cm depth shows that in thawed soil ksoil was around 0.7 W m−1 K−1, while in frozen soil it was around 1.9 W m−1 K−1. The transition between both values took place within a few days, with faster thawing than freezing and a hysteresis effect evidenced in the thermal conductivity–liquid water content relationship. The fast transitions suggest that the use of a bimodal distribution of ksoil for modelling may be an interesting option that deserves further testing. Simulations of ksnow using the snow physics model Crocus were performed. Contrary to observations, Crocus predicts high ksnow values at the base of the snowpack (0.12–0.27 W m−1 K−1) and low ones in its upper parts (0.02–0.12 W m−1 K−1). We diagnose that this is because Crocus does not describe the large upward water vapour fluxes caused by the temperature gradient in the snow and soil. These fluxes produce mass transfer between the soil and lower snow layers to the upper snow layers and the atmosphere. Finally, we discuss the importance of the structure and properties of the Arctic snowpack on subnivean life, as species such as lemmings live under the snow most of the year and must travel in the lower snow layer in search of food.

Marine snow morphology illuminates the evolution of phytoplankton blooms and determines their subsequent vertical export
Emilia Trudnowska, Léo Lacour, Mathieu Ardyna, Andreas Rogge +4 more
2021· Nature Communications121doi:10.1038/s41467-021-22994-4

Abstract The organic carbon produced in the ocean’s surface by phytoplankton is either passed through the food web or exported to the ocean interior as marine snow. The rate and efficiency of such vertical export strongly depend on the size, structure and shape of individual particles, but apart from size, other morphological properties are still not quantitatively monitored. With the growing number of in situ imaging technologies, there is now a great possibility to analyze the morphology of individual marine snow. Thus, automated methods for their classification are urgently needed. Consequently, here we present a simple, objective categorization method of marine snow into a few ecologically meaningful functional morphotypes using field data from successive phases of the Arctic phytoplankton bloom. The proposed approach is a promising tool for future studies aiming to integrate the diversity, composition and morphology of marine snow into our understanding of the biological carbon pump.

Snow spectral albedo at Summit, Greenland: measurements and numerical simulations based on physical and chemical properties of the snowpack
Carlo Maria Carmagnola, Florent Dominé, Marie Dumont, Patrick J. Wright +4 more
2013· ˜The œcryosphere121doi:10.5194/tc-7-1139-2013

Abstract. The broadband albedo of surface snow is determined both by the near-surface profile of the physical and chemical properties of the snowpack and by the spectral and angular characteristics of the incident solar radiation. Simultaneous measurements of the physical and chemical properties of snow were carried out at Summit Camp, Greenland (72°36´ N, 38°25´ W, 3210 m a.s.l.) in May and June 2011, along with spectral albedo measurements. One of the main objectives of the field campaign was to test our ability to predict snow spectral albedo by comparing the measured albedo to the albedo calculated with a radiative transfer model, using measured snow physical and chemical properties. To achieve this goal, we made daily measurements of the snow spectral albedo in the range 350–2200 nm and recorded snow stratigraphic information down to roughly 80 cm. The snow specific surface area (SSA) was measured using the DUFISSS instrument (DUal Frequency Integrating Sphere for Snow SSA measurement, Gallet et al., 2009). Samples were also collected for chemical analyses including black carbon (BC) and dust, to evaluate the impact of light absorbing particulate matter in snow. This is one of the most comprehensive albedo-related data sets combining chemical analysis, snow physical properties and spectral albedo measurements obtained in a polar environment. The surface albedo was calculated from density, SSA, BC and dust profiles using the DISORT model (DIScrete Ordinate Radiative Transfer, Stamnes et al., 1988) and compared to the measured values. Results indicate that the energy absorbed by the snowpack through the whole spectrum considered can be inferred within 1.10%. This accuracy is only slightly better than that which can be obtained considering pure snow, meaning that the impact of impurities on the snow albedo is small at Summit. In the near infrared, minor deviations in albedo up to 0.014 can be due to the accuracy of radiation and SSA measurements and to the surface roughness, whereas deviations up to 0.05 can be explained by the spatial heterogeneity of the snowpack at small scales, the assumption of spherical snow grains made for DISORT simulations and the vertical resolution of measurements of surface layer physical properties. At 1430 and around 1800 nm the discrepancies are larger and independent of the snow properties; we propose that they are due to errors in the ice refractive index at these wavelengths. This work contributes to the development of physically based albedo schemes in detailed snowpack models, and to the improvement of retrieval algorithms for estimating snow properties from remote sensing data.

Tracing the transport of colored dissolved organic matter in water masses of the Southern Beaufort Sea: relationship with hydrographic characteristics
A. Matsuoka, Annick Bricaud, Ronald Benner, J. Para +4 more
2011· Biogeosciences118doi:10.5194/bg-9-925-2012

Abstract. Light absorption by colored dissolved organic matter (CDOM) (aCDOM(λ)) plays an important role in the heat budget of the Arctic Ocean, contributing to the recent decline in sea ice, as well as in biogeochemical processes. We investigated aCDOM(λ) in the Southern Beaufort Sea where a significant amount of CDOM is delivered by the Mackenzie River. In the surface layer, aCDOM(440) showed a strong and negative correlation with salinity, indicating strong river influence and conservative transport in the river plume. Below the mixed layer, a weak but positive correlation between aCDOM(440) and salinity was observed above the upper halocline, resulting from the effect of removal of CDOM due to brine rejection and lateral intrusion of Pacific summer waters into these layers. In contrast, the relationship was negative in the upper and the lower haloclines, suggesting these waters originated from Arctic coastal waters. DOC concentrations in the surface layer were strongly correlated with aCDOM(440) (r2= 0.97), suggesting that this value can be estimated in this area, using aCDOM(440) that is retrieved using satellite ocean color data. Implications for estimation of DOC concentrations in surface waters using ocean color remote sensing are discussed.

The growth of shrubs on high Arctic tundra at Bylot Island: impact on snow physical properties and permafrost thermal regime
Florent Dominé, Mathieu Barrere, Samuel Morin
2016· Biogeosciences111doi:10.5194/bg-13-6471-2016

Abstract. With climate warming, shrubs have been observed to grow on Arctic tundra. Their presence is known to increase snow height and is expected to increase the thermal insulating effect of the snowpack. An important consequence would be the warming of the ground, which will accelerate permafrost thaw, providing an important positive feedback to warming. At Bylot Island (73° N, 80° W) in the Canadian high Arctic where bushes of willows (Salix richardsonii Hook) are growing, we have observed the snow stratigraphy and measured the vertical profiles of snow density, thermal conductivity and specific surface area (SSA) in over 20 sites of high Arctic tundra and in willow bushes 20 to 40 cm high. We find that shrubs increase snow height, but only up to their own height. In shrubs, snow density, thermal conductivity and SSA are all significantly lower than on herb tundra. In shrubs, depth hoar which has a low thermal conductivity was observed to grow up to shrub height, while on herb tundra, depth hoar only developed to 5 to 10 cm high. The thermal resistance of the snowpack was in general higher in shrubs than on herb tundra. More signs of melting were observed in shrubs, presumably because stems absorb radiation and provide hotspots that initiate melting. When melting was extensive, thermal conductivity was increased and thermal resistance was reduced, counteracting the observed effect of shrubs in the absence of melting. Simulations of the effect of shrubs on snow properties and on the ground thermal regime were made with the Crocus snow physics model and the ISBA (Interactions between Soil–Biosphere–Atmosphere) land surface scheme, driven by in situ and reanalysis meteorological data. These simulations did not take into account the summer impact of shrubs. They predict that the ground at 5 cm depth at Bylot Island during the 2014–2015 winter would be up to 13 °C warmer in the presence of shrubs. Such warming may however be mitigated by summer effects.

Implementation and evaluation of prognostic representations of the optical diameter of snow in the SURFEX/ISBA-Crocus detailed snowpack model
Carlo Maria Carmagnola, Samuel Morin, Matthieu Lafaysse, Florent Dominé +4 more
2014· ˜The œcryosphere108doi:10.5194/tc-8-417-2014

Abstract. In the SURFEX/ISBA-Crocus multi-layer snowpack model, the snow microstructure has up to now been characterised by the grain size and by semi-empirical shape variables which cannot be measured easily in the field or linked to other relevant snow properties. In this work we introduce a new formulation of snow metamorphism directly based on equations describing the rate of change of the optical diameter (dopt). This variable is considered here to be equal to the equivalent sphere optical diameter, which is inversely proportional to the specific surface area (SSA). dopt thus represents quantitatively some of the geometric characteristics of a porous medium. Different prognostic rate equations of dopt, including a re-formulation of the original Crocus scheme and the parameterisations from Taillandier et al. (2007) and Flanner and Zender (2006), were evaluated by comparing their predictions to field measurements carried out at Summit Camp (Greenland) in May and June 2011 and at Col de Porte (French Alps) during the 2009/10 and 2011/12 winter seasons. We focused especially on results in terms of SSA. In addition, we tested the impact of the different formulations on the simulated density profile, the total snow height, the snow water equivalent (SWE) and the surface albedo. Results indicate that all formulations perform well, with median values of the RMSD between measured and simulated SSA lower than 10 m2 kg−1. Incorporating the optical diameter as a fully fledged prognostic variable is an important step forward in the quantitative description of the snow microstructure within snowpack models, because it opens the way to data assimilation of various electromagnetic observations.

Optical characterisation of suspended particles in the Mackenzie River plume (Canadian Arctic Ocean) and implications for ocean colour remote sensing
David Doxaran, Jens K. Ehn, Simon Bélanger, Atsushi Matsuoka +2 more
2012· Biogeosciences102doi:10.5194/bg-9-3213-2012

Abstract. Climate change significantly impacts Arctic shelf regions in terms of air temperature, ultraviolet radiation, melting of sea ice, precipitation, thawing of permafrost and coastal erosion. Direct consequences have been observed on the increasing Arctic river flow and a large amount of organic carbon sequestered in soils at high latitudes since the last glacial maximum can be expected to be delivered to the Arctic Ocean during the coming decade. Monitoring the fluxes and fate of this terrigenous organic carbon is problematic in such sparsely populated regions unless remote sensing techniques can be developed and proved to be operational. The main objective of this study is to develop an ocean colour algorithm to operationally monitor dynamics of suspended particulate matter (SPM) on the Mackenzie River continental shelf (Canadian Arctic Ocean) using satellite imagery. The water optical properties are documented across the study area and related to concentrations of SPM and particulate organic carbon (POC). Robust SPM and POC : SPM proxies are identified, such as the light backscattering and attenuation coefficients, and relationships are established between these optical and biogeochemical parameters. Following a semi-analytical approach, a regional SPM quantification relationship is obtained for the inversion of the water reflectance signal into SPM concentration. This relationship is reproduced based on independent field optical measurements. It is successfully applied to a selection of MODIS satellite data which allow estimating fluxes at the river mouth and monitoring the extension and dynamics of the Mackenzie River surface plume in 2009, 2010 and 2011. Good agreement is obtained with field observations representative of the whole water column in the river delta zone where terrigenous SPM is mainly constrained (out of short periods of maximum river outflow). Most of the seaward export of SPM is observed to occur within the west side of the river mouth. Future work will require the validation of the developed SPM regional algorithm based on match-ups with field measurements, then the routine application to ocean colour satellite data in order to better estimate the fluxes and fate of SPM and POC delivered by the Mackenzie River to the Arctic Ocean.

Multisignal control of expression of the LHCX protein family in the marine diatom<i>Phaeodactylum tricornutum</i>
Lucilla Taddei, Giulio Rocco Stella, Alessandra Rogato, Benjamin Bailleul +4 more
2016· Journal of Experimental Botany98doi:10.1093/jxb/erw198

Diatoms are phytoplanktonic organisms that grow successfully in the ocean where light conditions are highly variable. Studies of the molecular mechanisms of light acclimation in the marine diatom Phaeodactylum tricornutum show that carotenoid de-epoxidation enzymes and LHCX1, a member of the light-harvesting protein family, both contribute to dissipate excess light energy through non-photochemical quenching (NPQ). In this study, we investigate the role of the other members of the LHCX family in diatom stress responses. Our analysis of available genomic data shows that the presence of multiple LHCX genes is a conserved feature of diatom species living in different ecological niches. Moreover, an analysis of the levels of four P. tricornutum LHCX transcripts in relation to protein expression and photosynthetic activity indicates that LHCXs are differentially regulated under different light intensities and nutrient starvation, mostly modulating NPQ capacity. We conclude that multiple abiotic stress signals converge to regulate the LHCX content of cells, providing a way to fine-tune light harvesting and photoprotection. Moreover, our data indicate that the expansion of the LHCX gene family reflects functional diversification of its members which could benefit cells responding to highly variable ocean environments.

Evaluating the performance of coupled snow–soil models in SURFEXv8 to simulate the permafrost thermal regime at a high Arctic site
Mathieu Barrere, Florent Dominé, Bertrand Decharme, Samuel Morin +2 more
2017· Geoscientific model development77doi:10.5194/gmd-10-3461-2017

Abstract. Climate change projections still suffer from a limited representation of the permafrost–carbon feedback. Predicting the response of permafrost temperature to climate change requires accurate simulations of Arctic snow and soil properties. This study assesses the capacity of the coupled land surface and snow models ISBA-Crocus and ISBA-ES to simulate snow and soil properties at Bylot Island, a high Arctic site. Field measurements complemented with ERA-Interim reanalyses were used to drive the models and to evaluate simulation outputs. Snow height, density, temperature, thermal conductivity and thermal insulance are examined to determine the critical variables involved in the soil and snow thermal regime. Simulated soil properties are compared to measurements of thermal conductivity, temperature and water content. The simulated snow density profiles are unrealistic, which is most likely caused by the lack of representation in snow models of the upward water vapor fluxes generated by the strong temperature gradients within the snowpack. The resulting vertical profiles of thermal conductivity are inverted compared to observations, with high simulated values at the bottom of the snowpack. Still, ISBA-Crocus manages to successfully simulate the soil temperature in winter. Results are satisfactory in summer, but the temperature of the top soil could be better reproduced by adequately representing surface organic layers, i.e., mosses and litter, and in particular their water retention capacity. Transition periods (soil freezing and thawing) are the least well reproduced because the high basal snow thermal conductivity induces an excessively rapid heat transfer between the soil and the snow in simulations. Hence, global climate models should carefully consider Arctic snow thermal properties, and especially the thermal conductivity of the basal snow layer, to perform accurate predictions of the permafrost evolution under climate change.

Automatic monitoring of the effective thermal conductivity of snow in a low-Arctic shrub tundra
Florent Dominé, M. Barrère, Denis Sarrazin, Samuel Morin +1 more
2015· ˜The œcryosphere70doi:10.5194/tc-9-1265-2015

Abstract. The effective thermal conductivity of snow, keff, is a critical variable which determines the temperature gradient in the snowpack and heat exchanges between the ground and the atmosphere through the snow. Its accurate knowledge is therefore required to simulate snow metamorphism, the ground thermal regime, permafrost stability, nutrient recycling and vegetation growth. Yet, few data are available on the seasonal evolution of snow thermal conductivity in the Arctic. We have deployed heated needle probes on low-Arctic shrub tundra near Umiujaq, Quebec, (N56°34'; W76°29') and monitored automatically the evolution of keff for two consecutive winters, 2012–2013 and 2013–2014, at four heights in the snowpack. Shrubs are 20 cm high dwarf birch. Here, we develop an algorithm for the automatic determination of keff from the heating curves and obtain 404 keff values. We evaluate possible errors and biases associated with the use of the heated needles. The time evolution of keff is very different for both winters. This is explained by comparing the meteorological conditions in both winters, which induced different conditions for snow metamorphism. In particular, important melting events in the second year increased snow hardness, impeding subsequent densification and increase in thermal conductivity. We conclude that shrubs have very important impacts on snow physical evolution: (1) shrubs absorb light and facilitate snow melt under intense radiation; (2) the dense twig network of dwarf birch prevent snow compaction, and therefore keff increase; (3) the low density depth hoar that forms within shrubs collapsed in late winter, leaving a void that was not filled by snow.

Macroscale patterns of oceanic zooplankton composition and size structure
Manoela C. Brandão, Fabio Benedetti, Séverine Martini, Yawouvi Dodji Soviadan +4 more
2021· Scientific Reports64doi:10.1038/s41598-021-94615-5

Abstract Ocean plankton comprise organisms from viruses to fish larvae that are fundamental to ecosystem functioning and the provision of marine services such as fisheries and CO 2 sequestration. The latter services are partly governed by variations in plankton community composition and the expression of traits such as body size at community-level. While community assembly has been thoroughly studied for the smaller end of the plankton size spectrum, the larger end comprises ectotherms that are often studied at the species, or group-level, rather than as communities. The body size of marine ectotherms decreases with temperature, but controls on community-level traits remain elusive, hindering the predictability of marine services provision. Here, we leverage Tara Oceans datasets to determine how zooplankton community composition and size structure varies with latitude, temperature and productivity-related covariates in the global surface ocean. Zooplankton abundance and median size decreased towards warmer and less productive environments, as a result of changes in copepod composition. However, some clades displayed the opposite relationships, which may be ascribed to alternative feeding strategies. Given that climate models predict increasingly warmed and stratified oceans, our findings suggest that zooplankton communities will shift towards smaller organisms which might weaken their contribution to the biological carbon pump.

Responses of growth rate, pigment composition and optical properties of Cryptomonas sp. to light and nitrogen stresses
Antoine Sciandra, Luigi Lazzara, Hervé Claustre, Marcel Babin
2000· Marine Ecology Progress Series54doi:10.3354/meps201107

The cryptophyte Cryptomonas sp. was cultured in nitrogen- and light-limited conditions to investigate relationships between inherent optical properties (absorption and fluorescence), pigment contents, N/C ratio and somatic growth rate. The 2 limitations induced large variations in phycoerythrin (PE) and chlorophyll a (chl a) contents, with a significantly higher variation in PE than chl a&#13;\nunder nitrogen stress. Under N limitation, there is a significant relationship between the PE/chl a ratio and the growth rate. In the case of light perturbation, the ratio PE/chl a was slightly modified during photoacclimation. Emission and excitation spectra of PE and chl a showed that the coupling&#13;\nefficiency between these pigments is less affected by nitrogen than by light changes. It is suggested&#13;\nthat transfer of energy between PE and chl a is regulated differently when growth is limited by light&#13;\nor nitrogen. Under nitrogen deprivation, the pool of PE is preferentially degraded to reduce the&#13;\nenergy transmitted to chl a, and to support the N demand. Under a light change, the energy harvested&#13;\nby PE and transferred to chl a is regulated by the coupling efficiency between the 2 pigments,&#13;\nand secondarily by synthesis or degradation of the PE quota. For each limitation, different relationships&#13;\nare shown between optical characteristics based on fluorescence ratios and growth rate.&#13;\nKEY WORDS: Cryptophyceae · Growth rate · Quota · Chlorophyll a · Phycoerythrin · Absorption ·&#13;\nFluorescence · Photoacclimation · Nitrogen limitation · Light limitation

Characterization of turbulence from a fine-scale parameterization and microstructure measurements in the Mediterranean Sea during the BOUM experiment
Yannis Cuypers, P. Bouruet-Aubertot, Claudie Marec, Jean‐Luc Fuda
2012· Biogeosciences53doi:10.5194/bg-9-3131-2012

Abstract. One of the main purposes of the BOUM experiment was to find evidence of the possible impact of submesoscale dynamics on biogeochemical cycles. To this aim physical as well as biogeochemical data were collected along a zonal transect through the western and eastern basins of the Mediterranean Sea. Along this transect 3-day fixed point stations were performed within anticyclonic eddies during which microstructure measurements of the temperature gradient were collected over the top 100 m of the water column. We focus here on the characterization of turbulent mixing. The analysis of microstructure measurements revealed a high level of turbulent kinetic energy (TKE) dissipation rate in the seasonal pycnocline and a moderate level below with mean values of the order of 10−6 W kg−1 and 10−8 W kg−1, respectively. The Gregg Henyey (Gregg, 1989) fine-scale parameterization of TKE dissipation rate produced by internal wave breaking, and adapted here following Polzin et al. (1995) to take into account the strain to shear ratio, was first compared to these direct measurements with favorable results. The parameterization was then applied to the whole data set. Within the eddies, a significant increase of dissipation at the top and base of eddies associated with strong near-inertial waves is observed. Vertical turbulent diffusivity is increased both in these regions and in the weakly stratified eddy core. The stations collected along the East–West transect provide an overview of parameterized TKE dissipation rates and vertical turbulent diffusivity over a latitudinal section of the Mediterranean Sea. Strong TKE dissipation rates are found within the first 500 m and up to 1500 m above the bottom. Close to the bottom where the stratification is weak, the inferred vertical turbulent diffusivity can reach Kz&amp;amp;simeq;10−3 m2 s−1 and may therefore have a strong impact on the upward diffusive transport of deep waters masses.

Light absorption and partitioning in Arctic Ocean surface waters: impact of multiyear ice melting
Simon Bélanger, Servet Çizmeli, Jens K. Ehn, Atsushi Matsuoka +3 more
2013· Biogeosciences53doi:10.5194/bg-10-6433-2013

Abstract. Ice melting in the Arctic Ocean exposes the surface water to more radiative energy with poorly understood effects on photo-biogeochemical processes and heat deposition in the upper ocean. In August 2009, we documented the vertical variability of light absorbing components at 37 stations located in the southeastern Beaufort Sea including both Mackenzie River-influenced waters and polar mixed layer waters. We found that melting multiyear ice released significant amount of non-algal particulates (NAP) near the sea surface relative to subsurface waters. NAP absorption coefficients at 440 nm (aNAP(440)) immediately below the sea surface were on average 3-fold (up to 10-fold) higher compared to subsurface values measured at 2–3 m depth. The impact of this unusual feature on the light transmission and remote sensing reflectance (Rrs) was further examined using a radiative transfer model. A 10-fold particle enrichment homogeneously distributed in the first meter of the water column slightly reduced photosynthetically available and usable radiation (PAR and PUR) by ∼6 and ∼8%, respectively, relative to a fully homogenous water column with low particle concentration. In terms of Rrs, the particle enrichment significantly flattered the spectrum by reducing the Rrs by up to 20% in the blue-green spectral region (400–550 nm). These results highlight the impact of meltwater on the concentration of particles at sea surface, and the need for considering non-uniform vertical distribution of particles in such systems when interpreting remotely sensed ocean color. Spectral slope of aNAP spectra calculated in the UV (ultraviolet) domain decreased with depth suggesting that this parameter is sensitive to detritus composition and/or diagenesis state (e.g., POM (particulate organic matter) photobleaching).

The Role of Sustained Photoprotective Non-photochemical Quenching in Low Temperature and High Light Acclimation in the Bloom-Forming Arctic Diatom Thalassiosira gravida
Thomas Lacour, Jade Larivière, Joannie Ferland, Flavienne Bruyant +2 more
2018· Frontiers in Marine Science49doi:10.3389/fmars.2018.00354

Thalassiosira gravida is a major Arctic diatom responsible for the under-ice spring bloom. We investigated T. gravida physiological plasticity growing it at two temperatures (0°C and 5°C) and under different light intensities typically found in its natural environment. T. gravida showed remarkable thermal- and photo-acclimatory plasticity including: low light saturation parameter for growth (KE) and photosynthesis (EK), low μmax but relatively high Chl a/C, low C/N and decreasing light-saturated carbon fixation rate (PCm) with increasing growth irradiance. T. gravida also showed remarkable photoprotective features, namely a strong sustained non photochemical quenching (NPQs, hour kinetics relaxation) supported by a high amount of xanthophyll cycle pigments. T. gravida growth remained possible under a wide range of irradiances but photosynthetic plasticity was higher at moderately low light (up to ~50 µmol photon m-2 s-1), nevertheless corresponding to the mean in situ conditions under which it predominates, i.e. underneath the spring thin-ice punctuated with melting ponds. The potential role of NPQs in the photophysiological plasticity of T. gravida is discussed.

A synthesis of light absorption properties of the Arctic Ocean: application to semianalytical estimates of dissolved organic carbon concentrations from space
Atsushi Matsuoka, Marcel Babin, David Doxaran, Stanford B. Hooker +3 more
2014· Biogeosciences47doi:10.5194/bg-11-3131-2014

Abstract. In addition to scattering coefficients, the light absorption coefficients of particulate and dissolved materials are the main factors determining the light propagation of the visible part of the spectrum and are, thus, important for developing ocean color algorithms. While these absorption properties have recently been documented by a few studies for the Arctic Ocean (e.g., Matsuoka et al., 2007, 2011; Ben Mustapha et al., 2012), the data sets used in the literature were sparse and individually insufficient to draw a general view of the basin-wide spatial and temporal variations in absorption. To achieve such a task, we built a large absorption database of the Arctic Ocean by pooling the majority of published data sets and merging new data sets. Our results show that the total nonwater absorption coefficients measured in the eastern Arctic Ocean (EAO; Siberian side) are significantly higher than in the western Arctic Ocean (WAO; North American side). This higher absorption is explained by higher concentration of colored dissolved organic matter (CDOM) in watersheds on the Siberian side, which contains a large amount of dissolved organic carbon (DOC) compared to waters off North America. In contrast, the relationship between the phytoplankton absorption (a&amp;amp;varphi;(λ)) and chlorophyll a (chl a) concentration in the EAO was not significantly different from that in the WAO. Because our semianalytical CDOM absorption algorithm is based on chl a-specific a&amp;amp;varphi;(λ) values (Matsuoka et al., 2013), this result indirectly suggests that CDOM absorption can be appropriately derived not only for the WAO but also for the EAO using ocean color data. Based on statistics, derived CDOM absorption values were reasonable compared to in situ measurements. By combining this algorithm with empirical DOC versus CDOM relationships, a semianalytical algorithm for estimating DOC concentrations for river-influenced coastal waters of the Arctic Ocean is presented and applied to satellite ocean color data.

The growth of sublimation crystals and surface hoar on the Antarctic plateau
Jean‐Charles Gallet, Florent Dominé, Joël Savarino, Marie Dumont +1 more
2014· ˜The œcryosphere47doi:10.5194/tc-8-1205-2014

Abstract. On the Antarctic plateau, precipitation quantities are so low that the surface mass budget is for an important part determined by exchanges of water vapor between the snow surface and the atmosphere surface. At Dome C (75° S, 123° E), we have frequently observed the growth of crystals on the snow surface under calm sunny weather. Here we present the time variations of specific surface area (SSA) and density of these crystals. Using the detailed snow model Crocus, we conclude that the formation of these crystals was very likely due to the nighttime formation of surface hoar crystals and to the daytime formation of sublimation crystals. These latter crystals form by processes similar to those involved in the formation of frost flowers on young sea ice. The formation of these crystals impacts the albedo, mass and energy budget of the Antarctic plateau. In particular, the SSA variations of the surface layer can induce an instantaneous forcing at the snow surface up to −10 W m−2 at noon, resulting in a surface temperature drop of 0.45 K. This result confirms that snow SSA is a crucial variable to consider in the energy budget and climate of snow-covered surfaces.