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Toowoomba Hospital

Hospital / health systemToowoomba, Queensland, Australia

Research output, citation impact, and the most-cited recent papers from Toowoomba Hospital (Australia). Aggregated across the NobleBlocks index of 300M+ scholarly works.

Total works
2.7K
Citations
103.0K
h-index
128
i10-index
1.9K
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Toowoomba Hospital

Top-cited papers from Toowoomba Hospital

Simultaneous Determination of Moisture, Organic Carbon, and Total Nitrogen by Near Infrared Reflectance Spectrophotometry
Ram C. Dalal, Robert J Henry
1986· Soil Science Society of America Journal548doi:10.2136/sssaj1986.03615995005000010023x

Abstract Near infrared diffuse reflectance spectrophotometry, within the wavelength range 1100 to 2500 nm, was investigated for use in the simultaneous prediction of the moisture, organic C, and total N contents of air‐dried soils. An infraAlyzer 500 C (Technicon Instruments Corp.) scanning spectrophotometer was used to obtain near infrared reflectance of soils at 2‐nm intervals. Calibration equations for each of the soil constituents studied were based upon selection of the best combination of three wavelengths in a multiple regression analysis. The wavelengths selected for moisture, organic C, and total N, respectively, were 1926, 1954, and 2150 nm, 1744, 1870 and 2052 nm, and 1702, 1870 and 2052 nm. The standard errors of prediction for finely ground samples (<0.25 mm) from the top layers (0‐0.1, 0.1‐0.2, 0.2‐0.3, 0.3‐0.6 m) were 0.58, 0.16, and 0.014% for moisture, organic C, and total N, respectively. The standard errors of prediction, however, were much larger for coarsely ground soils (<2 mm), soils containing low amounts of organic C (<0.3%) and total N (<0.03%), and for those with a wide range in colors. Within a narrow range in soil color and at moderate amounts of organic matter (0.3–2.5%C), the near infrared reflectance technique provides a rapid, nondestructive, and simultaneous measurement of moisture, organic C and total N in soils

Does Maintaining Green Leaf Area in Sorghum Improve Yield under Drought? II. Dry Matter Production and Yield
Andrew Borrell, Graeme Hammer, R. G. Henzell
2000· Crop Science433doi:10.2135/cropsci2000.4041037x

Retention of green leaf area at maturity (GLAM), known as stay‐green, is used as an indicator of postanthesis drought resistance in sorghum [ Sorghum bicolor (L.) Moench] breeding programs in the USA and Australia. The critical issue is whether maintaining green leaves under postanthesis drought increases grain yield in stay‐green compared with senescent hybrids. Field studies were undertaken in northeastern Australia on a cracking and self‐mulching gray clay. Nine closely related hybrids varying in rate of leaf senescence were grown under two water‐limiting regimes, post‐flowering water deficit and terminal (pre‐ and postflowering) water deficit, and a fully irrigated control. Under terminal water deficit, grain yield was correlated positively with and negatively with rate of leaf senescence Grain yield also increased by ≈0.35 Mg ha −1 for every day that onset of leaf senescence was delayed beyond 76 DAE in the water‐limited treatments. Stay‐green hybrids produced 47% more postanthesis biomass than their senescent counterparts (920 vs. 624 g m −2 ) under the terminal water deficit regime. No differences in grain yield were found among eight of the nine hybrids under fully irrigated conditions, suggesting that the stay‐green trait did not constrain yield in the well‐watered control. The results indicate that sorghum hybrids possessing the stay‐green trait have a significant yield advantage under postanthesis drought compared with hybrids not possessing this trait.

Lignin-derived bio-based flame retardants toward high-performance sustainable polymeric materials
Haitang Yang, Bin Yu, Xiaodong Xu, Serge Bourbigot +2 more
2020· Green Chemistry433doi:10.1039/d0gc00449a

Lignin-derived flame retardants represent one of the most promising directions for next-generation flame retardants due to their sustainability, environmental benefits and comparable efficiency to current non-bio-based counterparts.

Modelling the impacts of pests and diseases on agricultural systems
Marcello Donatelli, Roger D. Magarey, Simone Bregaglio, L. Willocquet +2 more
2017· Agricultural Systems410doi:10.1016/j.agsy.2017.01.019

The improvement and application of pest and disease models to analyse and predict yield losses including those due to climate change is still a challenge for the scientific community. Applied modelling of crop diseases and pests has mostly targeted the development of support capabilities to schedule scouting or pesticide applications. There is a need for research to both broaden the scope and evaluate the capabilities of pest and disease models. Key research questions not only involve the assessment of the potential effects of climate change on known pathosystems, but also on new pathogens which could alter the (still incompletely documented) impacts of pests and diseases on agricultural systems. Yield loss data collected in various current environments may no longer represent a adequate reference to develop tactical, decision-oriented, models for plant diseases and pests and their impacts, because of the ongoing changes in climate patterns. Process-based agricultural simulation modelling, on the other hand, appears to represent a viable methodology to estimate the impacts of these potential effects. A new generation of tools based on state-of-the-art knowledge and technologies is needed to allow systems analysis including key processes and their dynamics over appropriate suitable range of environmental variables. This paper offers a brief overview of the current state of development in coupling pest and disease models to crop models, and discusses technical and scientific challenges. We propose a five-stage roadmap to improve the simulation of the impacts caused by plant diseases and pests; i) improve the quality and availability of data for model inputs; ii) improve the quality and availability of data for model evaluation; iii) improve the integration with crop models; iv) improve the processes for model evaluation; and v) develop a community of plant pest and disease modelers.

The Biology and Ecology of Heliothis-Armigera (Hubner) and Heliothis-Punctigera Wallengren (Lepidoptera, Noctuidae) in Australia - What Do We Know
Myron P. Zalucki, Gregory J. Daglish, S. Firempong, P. H. Twine
1986· Australian Journal of Zoology403doi:10.1071/zo9860779

The taxonomy and identification of Heliothis armigera and H. punctigera, their distribution and host plants in Australia, the effect of host plant on reproduction and on the development and survival of immature stages, their movements, population biology and dynamics, and their control, are reviewed. Areas where further study is desirable include: the nature of host plant selection and host species preference; adaptability to new cultivars; effects of host plant on development; detailed life-table studies on different host plants; the contribution of predation, parasitism and disease to mortality; factors responsible for fluctuations in populations between years, including the origins of outbreak populations; and control strategies other than insecticide treatment.

Effect of Dexmedetomidine Added to Standard Care on Ventilator-Free Time in Patients With Agitated Delirium
Michael C. Reade, Glenn M. Eastwood, Rinaldo Bellomo, Michael Bailey +4 more
2016· JAMA372doi:10.1001/jama.2016.2707

IMPORTANCE: Effective therapy has not been established for patients with agitated delirium receiving mechanical ventilation. OBJECTIVE: To determine the effectiveness of dexmedetomidine when added to standard care in patients with agitated delirium receiving mechanical ventilation. DESIGN, SETTING, AND PARTICIPANTS: The Dexmedetomidine to Lessen ICU Agitation (DahLIA) study was a double-blind, placebo-controlled, parallel-group randomized clinical trial involving 74 adult patients in whom extubation was considered inappropriate because of the severity of agitation and delirium. The study was conducted at 15 intensive care units in Australia and New Zealand from May 2011 until December 2013. Patients with advanced dementia or traumatic brain injury were excluded. INTERVENTIONS: Bedside nursing staff administered dexmedetomidine (or placebo) initially at a rate of 0.5 µg/kg/h and then titrated to rates between 0 and 1.5 µg/kg/h to achieve physician-prescribed sedation goals. The study drug or placebo was continued until no longer required or up to 7 days. All other care was at the discretion of the treating physician. MAIN OUTCOMES AND MEASURES: Ventilator-free hours in the 7 days following randomization. There were 21 reported secondary outcomes that were defined a priori. RESULTS: Of the 74 randomized patients (median age, 57 years; 18 [24%] women), 2 withdrew consent later and 1 was found to have been randomized incorrectly, leaving 39 patients in the dexmedetomidine group and 32 patients in the placebo group for analysis. Dexmedetomidine increased ventilator-free hours at 7 days compared with placebo (median, 144.8 hours vs 127.5 hours, respectively; median difference between groups, 17.0 hours [95% CI, 4.0 to 33.2 hours]; P = .01). Among the 21 a priori secondary outcomes, none were significantly worse with dexmedetomidine, and several showed statistically significant benefit, including reduced time to extubation (median, 21.9 hours vs 44.3 hours with placebo; median difference between groups, 19.5 hours [95% CI, 5.3 to 31.1 hours]; P < .001) and accelerated resolution of delirium (median, 23.3 hours vs 40.0 hours; median difference between groups, 16.0 hours [95% CI, 3.0 to 28.0 hours]; P = .01). Using hierarchical Cox modeling to adjust for imbalanced baseline characteristics, allocation to dexmedetomidine was significantly associated with earlier extubation (hazard ratio, 0.47 [95% CI, 0.27-0.82]; P = .007). CONCLUSIONS AND RELEVANCE: Among patients with agitated delirium receiving mechanical ventilation in the intensive care unit, the addition of dexmedetomidine to standard care compared with standard care alone (placebo) resulted in more ventilator-free hours at 7 days. The findings support the use of dexmedetomidine in patients such as these. TRIAL REGISTRATION: clinicaltrials.gov Identifier: NCT01151865.

Long term trends in fertility of soils under continuous cultivation and cereal cropping in southern Queensland. II. Total organic carbon and its rate of loss from the soil profile
Ram C. Dalal, R. John Mayer
1986· Australian Journal of Soil Research369doi:10.1071/sr9860281

The kinetics of organic C loss were studied in six southern Queensland soils subjected to different periods (0-70 years) of cultivation and cereal cropping. The equation: Ct = Ce + (C0 - Ce)exp(- kt), where C0, Ce and C, are organic C contents initially, at equilibrium and at time k respectively, and k is the rate of loss of organic C from soil, was employed in the study. The parameter k was calculated both for %C (kc) and for weight of organic C/volume of soil (k,), determined by correcting for differences in sampling depth due to changes in bulk density upon cultivation. Mean annual rainfall largely determined both C, and Ce, presumably by influencing the amount of dry matter produced. Values of kc and kw varied greatly among the soils studied. For the 0-0.1 m depth, kw was 0.065, 0.080, 0.180, 0.259, 0.069 and 1.224 year-1 respectively for Waco (black earth - initially grassland), Langland-Logie (grey brown and red clays - brigalow), Cecilvale (grey, brown and red clays - poplar box), Billa Billa (grey, brown and red clays - belah), Thallon (grey, brown and red clays - coolibah) and Riverview (red earths - silver-leaved ironbark). The k values were significantly correlated with organic Chrease activity ratio (r = 0.99***) and reciprocal of clay content (r = 0.97**) of the virgin soils. In stepwise multiple regression analysis, aggregation index (for kc values) or exchangeable sodium percentage (for kw) and organic C/urease activity ratio of soils were significantly associated with the overall rate of loss of organic C. It was inferred, therefore, that the relative inaccessibility and protection of organic matter against microbial and enzymic attack resulted in reduced organic C loss. Losses of organic C from the deeper layers (0-0.2 m, 0-0.3 m) were observed in Waco, Langlands-Logie, Cecilvale and Riverview soils, although generally rate of loss decreased with depth.

The reported benefits of telehealth for rural Australians
Jennifer Moffatt, Diann Eley
2010· Australian Health Review367doi:10.1071/ah09794

Objective. A literature review was conducted to identify the reported benefits attributed to telehealth for people living and professionals working in rural and remote areas of Australia. Data sources. Scopus and relevant journals and websites were searched using the terms: telemedicine, telehealth, telepsychiatry, teledermatology, teleradiology, Australia, and each state and territory. Publications since 1998 were included. Study selection. The initial search resulted in 176 articles, which was reduced to 143 when research reporting on Australian rural, regional or remote populations was selected. Data synthesis. A narrative review was conducted using an existing ‘benefits’ framework. Patients are reported to have benefited from: lower costs and reduced inconvenience while accessing specialist health services; improved access to services and improved quality of clinical services. Health professionals are reported to have benefited from: access to continuing education and professional development; provision of enhanced local services; experiential learning, networking and collaboration. Discussion. Rural Australians have reportedly benefited from telehealth. The reported improved access and quality of clinical care available to rural Australians through telemedicine and telehealth may contribute to decreasing the urban–rural health disparities. The reported professional development opportunities and support from specialists through the use of telehealth may contribute to improved rural medical workforce recruitment and retention. What is known about the topic? An extensive international literature has reported on the efficacy of telehealth, and to a lesser extent the clinical outcomes and cost-effectiveness of telemedicine. Systematic reviews conclude that the quality of the studies preclude definitive conclusions being drawn about clinical and cost-effectiveness, although there is some evidence of effective clinical outcomes and the potential for cost-benefits. Little attention has been paid to the benefits reported for people who live in rural and remote Australia, despite this being a rationale for the use of telehealth in rural and remote locations. What does this paper add? Patients in rural and remote locations in Australia are reported to benefit from telehealth by increased access to health services and up-skilled health professionals. Health professionals are reported to benefit from telehealth by up-skilling from increased contact with specialists and increased access to professional development. The review findings suggest that one strategy, the increased use of telehealth, has the potential to reduce the inequitable access to health services and the poorer health status that many rural Australians experience, and contribute to addressing the on-going problem of the recruitment and retention of the rural health workforce. What are the implications for practitioners? The use of telehealth appears to be a path to up-skilling for rural and remote practitioners.

Cross-Validatory Choice of the Number of Components From a Principal Component Analysis
Henry T. Eastment, W. J. Krzanowski
1982· Technometrics364doi:10.1080/00401706.1982.10487712

A method is described for choosing the number of components to retain in a principal component analysis when the aim is dimensionality reduction. The correspondence between principal component analysis and the singular value decomposition of the data matrix is used. The method is based on successively predicting each element in the data matrix after deleting the corresponding row and column of the matrix, and makes use of recently published algorithms for updating a singular value decomposition. These are very fast, which renders the proposed technique a practicable one for routine data analysis.

Ruminant enteric methane mitigation: a review
DJ Cottle, J. V. Nolan, S. G. Wiedemann
2011· Animal Production Science332doi:10.1071/an10163

In Australia, agriculture is responsible for ~17% of total greenhouse gas emissions with ruminants being the largest single source. However, agriculture is likely to be shielded from the full impact of any future price on carbon. In this review, strategies for reducing ruminant methane output are considered in relation to rumen ecology and biochemistry, animal breeding and management options at an animal, farm, or national level. Nutritional management strategies have the greatest short-term impact. Methanogenic microorganisms remove H2 produced during fermentation of organic matter in the rumen and hind gut. Cost-effective ways to change the microbial ecology to reduce H2 production, to re-partition H2 into products other than methane, or to promote methanotrophic microbes with the ability to oxidise methane still need to be found. Methods of inhibiting methanogens include: use of antibiotics; promoting viruses/bacteriophages; use of feed additives such as fats and oils, or nitrate salts, or dicarboxylic acids; defaunation; and vaccination against methanogens. Methods of enhancing alternative H2 using microbial species include: inoculating with acetogenic species; feeding highly digestible feed components favouring ‘propionate fermentations’; and modifying rumen conditions. Conditions that sustain acetogen populations in kangaroos and termites, for example, are poorly understood but might be extended to ruminants. Mitigation strategies are not in common use in extensive grazing systems but dietary management or use of growth promotants can reduce methane output per unit of product. New, natural compounds that reduce rumen methane output may yet be found. Smaller but more permanent benefits are possible using genetic approaches. The indirect selection criterion, residual feed intake, when measured on ad libitum grain diets, has limited relevance for grazing cattle. There are few published estimates of genetic parameters for feed intake and methane production. Methane-related single nucleotide polymorphisms have yet to be used commercially. As a breeding objective, the use of methane/kg product rather than methane/head is recommended. Indirect selection via feed intake may be more cost-effective than via direct measurement of methane emissions. Life cycle analyses indicate that intensification is likely to reduce total greenhouse gas output but emissions and sequestration from vegetation and soil need to be addressed. Bio-economic modelling suggests most mitigation options are currently not cost-effective.

Simulation of growth and development of diverse legume species in APSIM
M. J. Robertson, P. S. Carberry, N.I. Huth, J. E. Turpin +4 more
2002· Australian Journal of Agricultural Research330doi:10.1071/ar01106

This paper describes the physiological basis and validation of a generic legume model as it applies to 4 species: chickpea ( Cicer arietinum L.), mungbean ( Vigna radiata (L.) Wilczek), peanut ( Arachis hypogaea L.), and lucerne ( Medicago sativa L.). For each species, the key physiological parameters were derived from the literature and our own experimentation. The model was tested on an independent set of experiments, predominantly from the tropics and subtropics of Australia, varying in cultivar, sowing date, water regime (irrigated or dryland), row spacing, and plant population density. The model is an attempt to simulate crop growth and development with satisfactory comprehensiveness, without the necessity of defining a large number of parameters. A generic approach was adopted in recognition of the common underlying physiology and simulation approaches for many legume species. Simulation of grain yield explained 77, 81, and 70% of the variance (RMSD = 31, 98, and 46 g/m2) for mungbean ( n = 40, observed mean = 123 g/m2), peanut ( n = 30, 421 g/m2), and chickpea ( n = 31, 196 g/m2), respectively. Biomass at maturity was simulated less accurately, explaining 64, 76, and 71% of the variance (RMSD = 134, 236, and 125 g/m2) for mungbean, peanut, and chickpea, respectively. RMSD for biomass in lucerne ( n = 24) was 85 g/m2 with an R 2 of 0.55. Simulation accuracy is similar to that achieved by single-crop models and suggests that the generic approach offers promise for simulating diverse legume species without loss of accuracy or physiological rigour.

Impacts of the Madden–Julian Oscillation on Australian Rainfall and Circulation
Matthew C. Wheeler, Harry H. Hendon, Sam Cleland, Holger Meinke +1 more
2008· Journal of Climate330doi:10.1175/2008jcli2595.1

Abstract Impacts of the Madden–Julian oscillation (MJO) on Australian rainfall and circulation are examined during all four seasons. The authors examine circulation anomalies and a number of different rainfall metrics, each composited contemporaneously for eight MJO phases derived from the real-time multivariate MJO index. Multiple rainfall metrics are examined to allow for greater relevance of the information for applications. The greatest rainfall impact of the MJO occurs in northern Australia in (austral) summer, although in every season rainfall impacts of various magnitude are found in most locations, associated with corresponding circulation anomalies. In northern Australia in all seasons except winter, the rainfall impact is explained by the direct influence of the MJO’s tropical convective anomalies, while in winter a weaker and more localized signal in northern Australia appears to result from the modulation of the trade winds as they impinge upon the eastern coasts, especially in the northeast. In extratropical Australia, on the other hand, the occurrence of enhanced (suppressed) rainfall appears to result from induced upward (downward) motion within remotely forced extratropical lows (highs), and from anomalous low-level northerly (southerly) winds that transport moisture from the tropics. Induction of extratropical rainfall anomalies by remotely forced lows and highs appears to operate mostly in winter, whereas anomalous meridional moisture transport appears to operate mainly in the summer, autumn, and to some extent in the spring.

Stay‐green: A consequence of the balance between supply and demand for nitrogen during grain filling?
Andrew Borrell, Graeme Hammer, Erik van Oosterom
2001· Annals of Applied Biology306doi:10.1111/j.1744-7348.2001.tb00088.x

Summary Retention of green leaf area in grain sorghum under post‐anthesis drought, known as stay‐green, is associated with greater biomass production, lodging resistance and yield. The stay‐green phenomenon can be examined at a cell, leaf, or whole plant level. At a cell level, the retention of chloroplast proteins such as LHCP2, OEC33 and Rubisco until late in senescence has been reported in sorghum containing the KS19 source of stay‐green, indicating that photosynthesis may be maintained for longer during senescence in these genotypes. At a leaf level, longevity of photosynthetic apparatus is intimately related to nitrogen (N) status. At a whole plant level, stay‐green can be viewed as a consequence of the balance between N demand by the grain and N supply during grain filling. To examine some of these concepts, nine hybrids varying in the B35 and KS19 sources of stay‐green were grown under a post‐anthesis water deficit. Genotypic variation in delayed onset and reduced rate of leaf senescence were explained by differences in specific leaf nitrogen (SLN) and N uptake during grain filling. Matching N supply from age‐related senescence and N uptake during grain filling with grain N demand found that the shortfall in N supply for grain filling was greater in the senescent than stay‐green hybrids, resulting in more accelerated leaf senescence in the former. We hypothesise that increased N uptake by stay‐green hybrids is a result of greater biomass accumulation during grain filling in response to increased sink demand (higher grain numbers) which, in turn, is the result of increased radiation use efficiency and transpiration efficiency due to higher SLN. Delayed leaf senescence resulting from higher SLN should, in turn, allow more carbon and nitrogen to be allocated to the roots of stay‐green hybrids during grain filling, thereby maintaining a greater capacity to extract N from the soil compared with senescent hybrids.

Environment characterization as an aid to wheat improvement: interpreting genotype–environment interactions by modelling water-deficit patterns in North-Eastern Australia
Karine Chenu, Mark Cooper, Graeme Hammer, Ky L. Mathews +2 more
2011· Journal of Experimental Botany296doi:10.1093/jxb/erq459

Genotype-environment interactions (GEI) limit genetic gain for complex traits such as tolerance to drought. Characterization of the crop environment is an important step in understanding GEI. A modelling approach is proposed here to characterize broadly (large geographic area, long-term period) and locally (field experiment) drought-related environmental stresses, which enables breeders to analyse their experimental trials with regard to the broad population of environments that they target. Water-deficit patterns experienced by wheat crops were determined for drought-prone north-eastern Australia, using the APSIM crop model to account for the interactions of crops with their environment (e.g. feedback of plant growth on water depletion). Simulations based on more than 100 years of historical climate data were conducted for representative locations, soils, and management systems, for a check cultivar, Hartog. The three main environment types identified differed in their patterns of simulated water stress around flowering and during grain-filling. Over the entire region, the terminal drought-stress pattern was most common (50% of production environments) followed by a flowering stress (24%), although the frequencies of occurrence of the three types varied greatly across regions, years, and management. This environment classification was applied to 16 trials relevant to late stages testing of a breeding programme. The incorporation of the independently-determined environment types in a statistical analysis assisted interpretation of the GEI for yield among the 18 representative genotypes by reducing the relative effect of GEI compared with genotypic variance, and helped to identify opportunities to improve breeding and germplasm-testing strategies for this region.

WNT16 Influences Bone Mineral Density, Cortical Bone Thickness, Bone Strength, and Osteoporotic Fracture Risk
Hou‐Feng Zheng, Jonathan H. Tobias, Emma L. Duncan, David M. Evans +4 more
2012· PLoS Genetics295doi:10.1371/journal.pgen.1002745

We aimed to identify genetic variants associated with cortical bone thickness (CBT) and bone mineral density (BMD) by performing two separate genome-wide association study (GWAS) meta-analyses for CBT in 3 cohorts comprising 5,878 European subjects and for BMD in 5 cohorts comprising 5,672 individuals. We then assessed selected single-nucleotide polymorphisms (SNPs) for osteoporotic fracture in 2,023 cases and 3,740 controls. Association with CBT and forearm BMD was tested for ∼2.5 million SNPs in each cohort separately, and results were meta-analyzed using fixed effect meta-analysis. We identified a missense SNP (Thr>Ile; rs2707466) located in the WNT16 gene (7q31), associated with CBT (effect size of -0.11 standard deviations [SD] per C allele, P = 6.2 × 10(-9)). This SNP, as well as another nonsynonymous SNP rs2908004 (Gly>Arg), also had genome-wide significant association with forearm BMD (-0.14 SD per C allele, P = 2.3 × 10(-12), and -0.16 SD per G allele, P = 1.2 × 10(-15), respectively). Four genome-wide significant SNPs arising from BMD meta-analysis were tested for association with forearm fracture. SNP rs7776725 in FAM3C, a gene adjacent to WNT16, was associated with a genome-wide significant increased risk of forearm fracture (OR = 1.33, P = 7.3 × 10(-9)), with genome-wide suggestive signals from the two missense variants in WNT16 (rs2908004: OR = 1.22, P = 4.9 × 10(-6) and rs2707466: OR = 1.22, P = 7.2 × 10(-6)). We next generated a homozygous mouse with targeted disruption of Wnt16. Female Wnt16(-/-) mice had 27% (P<0.001) thinner cortical bones at the femur midshaft, and bone strength measures were reduced between 43%-61% (6.5 × 10(-13)<P<5.9 × 10(-4)) at both femur and tibia, compared with their wild-type littermates. Natural variation in humans and targeted disruption in mice demonstrate that WNT16 is an important determinant of CBT, BMD, bone strength, and risk of fracture.

High-throughput phenotyping of seminal root traits in wheat
Cécile Richard, Lee T. Hickey, Susan Fletcher, Raeleen Jennings +2 more
2015· Plant Methods278doi:10.1186/s13007-015-0055-9

BACKGROUND: Water availability is a major limiting factor for wheat (Triticum aestivum L.) production in rain-fed agricultural systems worldwide. Root system architecture has important functional implications for the timing and extent of soil water extraction, yet selection for root architectural traits in breeding programs has been limited by a lack of suitable phenotyping methods. The aim of this research was to develop low-cost high-throughput phenotyping methods to facilitate selection for desirable root architectural traits. Here, we report two methods, one using clear pots and the other using growth pouches, to assess the angle and the number of seminal roots in wheat seedlings- two proxy traits associated with the root architecture of mature wheat plants. RESULTS: Both methods revealed genetic variation for seminal root angle and number in the panel of 24 wheat cultivars. The clear pot method provided higher heritability and higher genetic correlations across experiments compared to the growth pouch method. In addition, the clear pot method was more efficient - requiring less time, space, and labour compared to the growth pouch method. Therefore the clear pot method was considered the most suitable for large-scale and high-throughput screening of seedling root characteristics in crop improvement programs. CONCLUSIONS: The clear-pot method could be easily integrated in breeding programs targeting drought tolerance to rapidly enrich breeding populations with desirable alleles. For instance, selection for narrow root angle and high number of seminal roots could lead to deeper root systems with higher branching at depth. Such root characteristics are highly desirable in wheat to cope with anticipated future climate conditions, particularly where crops rely heavily on stored soil moisture at depth, including some Australian, Indian, South American, and African cropping regions.

Cohort Profile: Geelong Osteoporosis Study
J. A. Pasco, Geoffrey C. Nicholson, Mark A. Kotowicz
2011· International Journal of Epidemiology260doi:10.1093/ije/dyr148

The Geelong Osteoporosis Study (GOS) began as a population-based study designed to investigate the epidemiology of osteoporosis in Australia. Osteoporosis is a systemic skeletal disease characterized by low bone mineral density (BMD) and micro-architectural deterioration of bone tissue, with a consequent increase in susceptibility to fracture. Fragility fractures at the spine, hip, wrist and other sites are a major public health problem in both sexes because these fractures are responsible for considerable morbidity and mortality. Fractures cost the Australian community an estimated $7 billion annually and this is expected to increase in absolute terms because of the ageing population. The cohort was recruited to address the need for definitive data on the prevalence of osteoporosis, to describe age-related changes in BMD and to characterize the risks for osteoporosis and fracture. Initially the GOS comprised only women; men were recruited later. In addition to the cohort study, the GOS has developed a comprehensive fracture register for the study region and has also conducted case–control studies to investigate risk factors for fracture. Only the cohort study will be described here.

Nitrogen Dynamics and the Physiological Basis of Stay‐Green in Sorghum
Andrew Borrell, Graeme Hammer
2000· Crop Science259doi:10.2135/cropsci2000.4051295x

Sorghum [ Sorghum bicolor (L.) Moench] hybrids containing the stay‐green trait retain more photosynthetically active leaves under drought than do hybrids that do not contain this trait. Since the longevity and photosynthetic capacity of a leaf are related to its N status, it is important to clarify the role of N in extending leaf greenness in stay‐green hybrids. Field studies were conducted in northeastern Australia to examine the effect of three water regimes and nine hybrids on N uptake and partitioning among organs. Nine hybrids varying in the B35 and KS19 sources of stay‐green were grown under a fully irrigated control, post‐flowering water deficit, and terminal water deficit. For hybrids grown under terminal water deficit, stay‐green was viewed as a consequence of the balance between N demand by the grain and N supply during grain filling. On the demand side, grain numbers were 16% higher in the four stay‐green than in the five senescent hybrids. On the supply side, age‐related senescence provided an average of 34 and 42 kg N ha −1 for stay‐green and senescent hybrids, respectively. In addition, N uptake during grain filling averaged 116 and 82 kg ha −1 in stay‐green and senescent hybrids. Matching the N supply from these two sources with grain N demand found that the shortfall in N supply for grain filling in the stay‐green and senescent hybrids averaged 32 and 41 kg N ha −1 , resulting in more accelerated leaf senescence in the senescent hybrids. Genotypic differences in delayed onset and reduced rate of leaf senescence were explained by differences in specific leaf nitrogen and N uptake during grain filling. Leaf nitrogen concentration at anthesis was correlated with onset and rate of leaf senescence under terminal water deficit.

Does Maintaining Green Leaf Area in Sorghum Improve Yield under Drought? I. Leaf Growth and Senescence
Andrew Borrell, Graeme Hammer, Andrew C. L. Douglas
2000· Crop Science258doi:10.2135/cropsci2000.4041026x

Production of sorghum [ Sorghum bicolor (L.) Moench], an important cereal crop in semiarid regions of the world, is often limited by drought. When water is limiting during the grain‐filling period, hybrids possessing the stay‐green trait maintain more photosynthetically active leaves than hybrids not possessing this trait. To improve yield under drought, knowledge of the extent of genetic variation in green leaf area retention is required. Field studies were undertaken in northeastern Australia on a cracking and self‐mulching gray clay to determine the effects of water regime and hybrid on the components of green leaf area at maturity (GLAM). Nine hybrids varying in stay‐green were grown under a fully irrigated control, postflowering water deficit, and terminal (pre‐ and postflowering) water deficit. Water deficit reduced GLAM by 67% in the terminal drought treatment compared with the fully irrigated control. Under terminal water deficit, hybrids possessing the B35 and KS19 sources of stay‐green retained more GLAM (1260 cm 2 plant −1 ) compared with intermediate (780 cm 2 plant −1 ) and senescent (670 cm 2 plant −1 ) hybrids. RQL12 hybrids (KS19 source of stay‐green) displayed delayed onset and reduced rate of senescence; A35 hybrids displayed only delayed onset. Visual rating of green leaf retention was highly correlated with measured GLAM, although this procedure is constrained by an inability to distinguish among the functional mechanisms determining the phenotype. Linking functional rather than phenotypic differences to molecular markers may improve the efficiency of selecting for traits such as stay‐green.

A Review of the Trends and Challenges in Adopting Natural Language Processing Methods for Education Feedback Analysis
Thanveer Shaik, Xiaohui Tao, Yan Li, Christopher Dann +3 more
2022· IEEE Access253doi:10.1109/access.2022.3177752

Artificial Intelligence (AI) is a fast-growing area of study that stretching its presence to many business and research domains. Machine learning, deep learning, and natural language processing (NLP) are subsets of AI to tackle different areas of data processing and modelling. This review article presents an overview of AI&#x2019;s impact on education outlining with current opportunities. In the education domain, student feedback data is crucial to uncover the merits and demerits of existing services provided to students. AI can assist in identifying the areas of improvement in educational infrastructure, learning management systems, teaching practices and study environment. NLP techniques play a vital role in analyzing student feedback in textual format. This research focuses on existing NLP methodologies and applications that could be adapted to educational domain applications like sentiment annotations, entity annotations, text summarization, and topic modelling. Trends and challenges in adopting NLP in education were reviewed and explored. Context-based challenges in NLP like sarcasm, domain-specific language, ambiguity, and aspect-based sentiment analysis are explained with existing methodologies to overcome them. Research community approaches to extract the semantic meaning of emoticons and special characters in feedback which conveys user opinion and challenges in adopting NLP in education are explored.