TÜBİTAK Marmara Research Center
governmentGebze, Kocaeli, Türkiye
Research output, citation impact, and the most-cited recent papers from TÜBİTAK Marmara Research Center (Türkiye). Aggregated across the NobleBlocks index of 300M+ scholarly works.
Top-cited papers from TÜBİTAK Marmara Research Center
The levels of phytochemicals (total phenols, proanthocyanidins, gallic acid + gallotannins, ellagic acid + ellagitannins, flavonoids, phenolic acids, stilbenes and phytates), fat-soluble bioactives (lipid, tocols, phytosterols, sphingolipids, carotenoids, chlorophylls and alkyl phenols) as well as natural antioxidants (nutrient and non-nutrient) present in commonly consumed twelve nuts (almond, Brazil nut, cashew, chestnut, hazelnut, heartnut, macadamia, peanut, pecan, pine nut, pistachio and walnut) are compared and reported. Recent studies adding new evidence for the health benefits of nuts are also discussed. Research findings from over 112 references, many of which have been published within last 10 years, have been compiled and reported.
Antioxidant efficacies of ethanol extracts of defatted raw hazelnut kernel and hazelnut byproducts (skin, hard shell, green leafy cover, and tree leaf) were evaluated by monitoring total antioxidant activity (TAA) and free-radical scavenging activity tests [hydrogen peroxide, superoxide radical, and 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical], together with antioxidant activity in a beta-carotene-linoleate model system, inhibition of oxidation of human low-density lipoprotein (LDL) cholesterol, and inhibition of strand breaking of supercoiled deoxyribonucleic acid (DNA). In addition, yield, content of phenolics, and phenolic acid profiles (free and esterified fractions) were also examined. Generally, extracts of hazelnut byproducts (skin, hard shell, green leafy cover, and tree leaf) exhibited stronger activities than hazelnut kernel at all concentrations tested. Hazelnut extracts examined showed different antioxidative efficacies, expected to be related to the presence of phenolic compounds. Among samples, extracts of hazelnut skin, in general, showed superior antioxidative efficacy and higher phenolic content as compared to other extracts. Five phenolic acids (gallic acid, caffeic acid, p-coumaric acid, ferulic acid, and sinapic acid) were tentatively identified and quantified (both free and esterified forms). Extracts contained different levels of phenolic acids. These results suggest that hazelnut byproducts could potentially be considered as an excellent and readily available source of natural antioxidants.
The development of edible films and coatings has seen remarkable growth in recent decades and is expected to have an important impact on the quality of food products in the coming years. This growth is attributed to the increasing knowledge of edible films and edible coating technology, as well as advances in material science and processing technology. Packaging is used in order to reduce synthetic packaging and can play a role as an eco-friendly biodegradable package or a protective coating on the food surface. A large amount of bio-based polymers have been used in the production of edible films and coatings. Novel sources of edible materials, as well as the novel processing techniques, are a subject of great interest due to their promising potential as innovative food packaging systems. This paper presents the concept and potential for application of new film-forming materials and management of food wastes from the fruit and vegetable industry, which can encounter problems in appropriate disposal. It summarizes the extensive knowledge about the new film-forming materials such as plant residues, flours and gums to show their protective effectiveness and suitability in various types of foods.
Abstract A new family of anthracene core, highly fluorescent emitters is synthesized which include diphenylamine hole transport end groups. Using a very simple one or two layer organic light emitting diode (OLED) structure, devices without outcoupling achieve an external quantum efficiency of 6% and photonic efficiencies of 20 cd/A. The theoretical maximum efficiency of such devices should not exceed 3.55%. Detailed photophysical characterization shows that for these anthracene based emitters 2T 1 ≤T n and so in this special case, triplet fusion can achieve a singlet production yield of 0.5. Indeed, delayed electroluminescence measurements show that triplet fusion contributes 59% of all singlets produced in these devices. This demonstrates that when triplet fusion becomes very efficient, fluorescent OLEDs even with very simple structures can approach an internal singlet production yield close to the theoretical absolute maximum of 62.5% and rival phosphorescent‐based OLEDs with the added advantage of much improved stability.
We use Global Positioning System (GPS) observations and elastic half-space models to estimate the distribution of coseismic and postseismic slip along the Izmit earthquake rupture. Our results indicate that large coseismic slip (reaching 5.7 meters) is confined to the upper 10 kilometers of the crust, correlates with structurally distinct fault segments, and is relatively low near the hypocenter. Continued surface deformation during the first 75 days after the earthquake indicates an aseismic fault slip of as much as 0.43 meters on and below the coseismic rupture. These observations are consistent with a transition from unstable (episodic large earthquakes) to stable (fault creep) sliding at the base of the seismogenic zone.
Amines are well-known for their reversible reactions with CO2, which make them ideal for CO2 capture from several gas streams, including flue gas. In this respect, selective CO2 absorption by aqueous alkanolamines is the most mature technology but the process is energy intensive and has also corrosion problems. Both disadvantages can be diminished to a certain extent by chemical adsorption of CO2 selectively. The most important element of the chemical adsorption of CO2 involves the design and development of a suitable adsorbent which consist of a porous support onto which an amine is attached or immobilized. Such an adsorbent is often called as solid amine sorbent. This review covers solid amine-based studies which are developed and published in recent years. First, the review examines several different types of porous support materials, namely, three mesoporous silica (MCM-41, SBA-15 and KIT-6) and two polymeric supports (PMMA and PS) for CO2 adsorption. Emphasis is given to the synthesis, modifications and characterizations -such as BET and PXRD data-of them. Amination of these supports to obtain a solid amine sorbent through impregnation or grafting is reviewed comparatively. Focus is given to the adsorption mechanisms, material characteristics, and synthesis methods which are discussed in detail. Significant amount of original data are also presented which makes this review unique. Finally, relevant CO2 adsorption (or equilibrium) capacity data, and cyclic adsorption/desorption performance and stability of important classes of solid amine sorbents are critically reviewed. These include severa PEI or TEPA impregnated adsorbents and APTES-grafted systems.
Earthquake scarps associated with recent historical events have been found on the floor of the Sea of Marmara, along the North Anatolian Fault (NAF). The MARMARASCARPS cruise using an unmanned submersible (ROV) provides direct observations to study the fine‐scale morphology and geology of those scarps, their distribution, and geometry. The observations are consistent with the diversity of fault mechanisms and the fault segmentation within the north Marmara extensional step‐over, between the strike‐slip Ganos and Izmit faults. Smaller strike‐slip segments and pull‐apart basins alternate within the main step‐over, commonly combining strike‐slip and extension. Rapid sedimentation rates of 1–3 mm/yr appear to compete with normal faulting components of up to 6 mm/yr at the pull‐apart margins. In spite of the fast sedimentation rates the submarine scarps are preserved and accumulate relief. Sets of youthful earthquake scarps extend offshore from the Ganos and Izmit faults on land into the Sea of Marmara. Our observations suggest that they correspond to the submarine ruptures of the 1999 Izmit (Mw 7.4) and the 1912 Ganos (Ms 7.4) earthquakes. While the 1999 rupture ends at the immediate eastern entrance of the extensional Cinarcik Basin, the 1912 rupture appears to have crossed the Ganos restraining bend into the Sea of Marmara floor for 60 km with a right‐lateral slip of 5 m, ending in the Central Basin step‐over. From the Gulf of Saros to Marmara the total 1912 rupture length is probably about 140 km, not 50 km as previously thought. The direct observations of submarine scarps in Marmara are critical to defining barriers that have arrested past earthquakes as well as defining a possible segmentation of the contemporary state of loading. Incorporating the submarine scarp evidence modifies substantially our understanding of the current state of loading along the NAF next to Istanbul. Coulomb stress modeling shows a zone of maximum loading with at least 4–5 m of slip deficit encompassing the strike‐slip segment 70 km long between the Cinarcik and Central Basins. That segment alone would be capable of generating a large‐magnitude earthquake (Mw 7.2). Other segments in Marmara appear less loaded.
A community-based sessile life style is the normal mode of growth and survival for many bacterial species. Under such conditions, cell-to-cell interactions are inevitable and ultimately lead to the establishment of dense, complex and highly structured biofilm populations encapsulated in a self-produced extracellular matrix and capable of coordinated and collective behavior. Remarkably, in food processing environments, a variety of different bacteria may attach to surfaces, survive, grow, and form biofilms. Salmonella enterica, Listeria monocytogenes, Escherichia coli, and Staphylococcus aureus are important bacterial pathogens commonly implicated in outbreaks of foodborne diseases, while all are known to be able to create biofilms on both abiotic and biotic surfaces. Particularly challenging is the attempt to understand the complexity of inter-bacterial interactions that can be encountered in such unwanted consortia, such as competitive and cooperative ones, together with their impact on the final outcome of these communities (e.g., maturation, physiology, antimicrobial resistance, virulence, dispersal). In this review, up-to-date data on both the intra- and inter-species interactions encountered in biofilms of these pathogens are presented. A better understanding of these interactions, both at molecular and biophysical levels, could lead to novel intervention strategies for controlling pathogenic biofilm formation in food processing environments and thus improve food safety.
The spread of infections in healthcare environments is a persistent and growing problem in most countries, aggravated by the development of microbial resistance to antibiotics and disinfectants. In addition to indwelling medical devices (e.g. implants, catheters), such infections may also result from adhesion of microbes either to external solid-water interfaces such as shower caps, taps, drains, etc., or to external solid-gas interfaces such as door handles, clothes, curtains, computer keyboards, etc. The latter are the main focus of the present work, where an overview of antimicrobial coatings for such applications is presented. This review addresses well-established and novel methodologies, including chemical and physical functional modification of surfaces to reduce microbial contamination, as well as the potential risks associated with the implementation of such anticontamination measures. Different chemistry-based approaches are discussed, for instance anti-adhesive surfaces (e.g. superhydrophobic, zwitterions), contact-killing surfaces (e.g. polymer brushes, phages), and biocide-releasing surfaces (e.g. triggered release, quorum sensing-based systems). The review also assesses the impact of topographical modifications at distinct dimensions (micrometre and nanometre orders of magnitude) and the importance of applying safe-by-design criteria (e.g. toxicity, contribution for unwanted acquisition of antimicrobial resistance, long-term stability) when developing and implementing antimicrobial surfaces.
In July 1999, an at-sea experiment to measure the focus of a 3.5-kHz centered time-reversal mirror (TRM) was conducted in three different environments: an absorptive bottom, a reflective bottom, and a sloping bottom. The experiment included a preliminary exploration of using a TRM to generate binary-phase shift keying communication sequences in each of these environments. Broadside communication transmissions were also made, and single-source communications were simulated using the measured-channel response. A comparison of the results is made and time reversal is shown to be an effective approach for mitigating inter-symbol interference caused by channel multipath.
Laboratory and theoretical studies suggest that earthquakes are preceded by a phase of developing slip instability in which the fault slips slowly before accelerating to dynamic rupture. We report here that one of the best-recorded large earthquakes to date, the 1999 moment magnitude (M(w)) 7.6 Izmit (Turkey) earthquake, was preceded by a seismic signal of long duration that originated from the hypocenter. The signal consisted of a succession of repetitive seismic bursts, accelerating with time, and increased low-frequency seismic noise. These observations show that the earthquake was preceded for 44 minutes by a phase of slow slip occurring at the base of the brittle crust. This slip accelerated slowly initially, and then rapidly accelerated in the 2 minutes preceding the earthquake.
The term "superfruit" has gained increasing usage and attention recently with the marketing strategy to promote the extraordinary health benefits of some exotic fruits, which may not have worldwide popularity. This has led to many studies with the identification and quantification of various groups of phytochemicals. This contribution discusses phytochemical compositions, antioxidant efficacies, and potential health benefits of the main superfruits such as açai, acerola, camu-camu, goji berry, jaboticaba, jambolão, maqui, noni, and pitanga. Novel product formulations, safety aspects, and future perspectives of these superfruits have also been covered. Research findings from the existing literature published within the last 10 years have been compiled and summarized. These superfruits having numerous phytochemicals (phenolic acids, flavonoids, proanthocyanidins, iridoids, coumarins, hydrolysable tannins, carotenoids, and anthocyanins) together with their corresponding antioxidant activities, have increasingly been utilized. Hence, these superfruits can be considered as a valuable source of functional foods due to the phytochemical compositions and their corresponding antioxidant activities. The phytochemicals from superfruits are bioaccessible and bioavailable in humans with promising health benefits. More well-designed human explorative studies are needed to validate the health benefits of these superfruits.
Five years of continuously recording GPS observations in the Kingdom of Saudi Arabia together with new continuous and survey‐mode GPS observations broadly distributed across the Arabian Peninsula provide the basis for substantially improved estimates of present‐day motion and internal deformation of the Arabian plate. We derive the following relative, geodetic Euler vectors (latitude (°N), longitude (°E), rate (°/Myr, counterclockwise)) for Arabia‐Nubia (31.7 ± 0.2, 24.6 ± 0.3, 0.37 ± 0.01), Arabia‐Somalia (22.0 ± 0.5, 26.2 ± 0.5, 0.40 ± 0.01), Arabia‐India (18.0 ± 3.8, 87.6 ± 3.3, 0.07 ± 0.01), Arabia‐Sinai (35.7 ± 0.8, 17.1 ± 5.0, 0.15 ± 0.04), and Arabia‐Eurasia (27.5 ± 0.1, 17.6 ± 0.3, 0.404 ± 0.004). We use these Euler vectors to estimate present‐day stability of the Arabian plate, the rate and direction of extension across the Red Sea and Gulf of Aden, and slip rates along the southern Dead Sea fault south of the Lebanon restraining bend (4.5–4.7 ± 0.2 mm/yr, left lateral; 0.8–1.1 ± 0.3 mm/yr extension) and the Owens fracture zone (3.2–2.5 ± 0.5 mm/yr, right lateral, increasing from north to south; 1–2 mm/yr extension). On a broad scale, the Arabian plate has no resolvable internal deformation (weighted root mean square of residual motions for Arabia equals 0.6 mm/yr), although there is marginally significant evidence for N‐S shortening in the Palmyride Mountains, Syria at ≤ 1.5 mm/yr. We show that present‐day Arabia plate motion with respect to Eurasia is consistent within uncertainties (i.e., ±10%) with plate tectonic estimates since the early Miocene when Arabia separated from Nubia. We estimate the time of Red Sea and Gulf of Aden rifting from present‐day Arabia motion, plate tectonic evidence for a 70% increase in Arabia‐Nubia relative motion at 13 Ma, and the width of the Red Sea and Gulf of Aden and find that rifting initiated roughly simultaneously (±2.2 Myr) along the strike of the Red Sea from the Gulf of Suez to the Afar Triple Junction, as well as along the West Gulf of Aden at 24 ± 2.2 Ma. Based on the present kinematics, we hypothesize that the negative buoyancy of the subducted ocean lithosphere beneath the Makran and the Zagros fold‐thrust belt is the principle driver of Arabia‐Eurasia convergence and that resisting forces associated with Arabia‐Eurasia continental collision have had little impact on plate motion.
The literature on apoptosis has grown tremendously in recent years, and the mechanisms that are involved in this programmed cell death pathway have been enlightened. It is now known that apoptosis takes place starting from early development to adult stage for the homeostasis of multicellular organisms, during disease development and in response to different stimuli in many different systems. In this review, we attempted to summarize the current knowledge on the circumstances and the mechanisms that lead to induction of apoptosis, while going over the molecular details of the modulator and mediators of apoptosis as well as drawing the lines between programmed and non-programmed cell death pathways. The review will particularly focus on Bcl-2 family proteins, the role of different caspases in the process of apoptosis, and their inhibitors as well as the importance of apoptosis during different disease states. Understanding the molecular mechanisms involved in apoptosis better will make a big impact on human diseases, particularly cancer, and its management in the clinics.
AIMS: To study and compare the efficacy of organic acids and chlorine dipping in inactivation of Escherichia coli and Listeria monocytogenes on fresh-cut iceberg lettuce. METHODS AND RESULTS: Fresh-cut iceberg lettuce leaves were inoculated with E. coli or L. monocytogenes. After inoculation, samples were stored at 4 degrees C for 24 h and dipped in organic acid or chlorine solutions for 2 and 5 min. E. coli and L. monocytogenes were enumerated on selective media. Treatment of fresh-cut iceberg lettuce with chlorine solution caused 1.0 and 2.0 log(10) CFU g(-1) reductions in the number of L. monocytogenes and E. coli, respectively. Maximum reduction for E. coli (about 2.0 log(10) CFU g(-1)) was obtained for samples dipped in lactic or citric acids while maximum reduction for L. monocytogenes (about 1.5 log(10) CFU g(-1)) was attained for samples dipped in lactic acid. CONCLUSIONS: Dipping of iceberg lettuce in 0.5% citric acid or 0.5% lactic acid solution for 2 min could be as effective as chlorine for reducing microbial populations on fresh-cut iceberg lettuce. SIGNIFICANCE AND IMPACT OF THE STUDY: Dipping in solutions containing organic acids is shown to be effective to reduce E. coli and L. monocytogenes on fresh-cut iceberg lettuce.
Scope The pomegranate lipid‐lowering properties remain controversial, probably due to the interindividual variability in polyphenol (ellagitannins) metabolism. Objective We aimed at investigating whether the microbially derived ellagitannin‐metabolizing phenotypes, i.e. urolithin metabotypes A, (UM‐A), B (UM‐B), and 0 (UM‐0), influence the effects of pomegranate extract (PE) consumption on 18 cardiovascular risk biomarkers in healthy overweight‐obese individuals. Methods and results A double‐blind, crossover, dose–response, randomized, placebo‐controlled trial was conducted. The study ( POMEcardio ) consisted of two test phases (dose‐1 and dose‐2, lasting 3 weeks each) and a 3‐week washout period between each phase. Forty‐nine participants (BMI > 27 kg/m 2 ) daily consumed one (dose‐1, 160 mg phenolics/day) or four (dose‐2, 640 mg phenolics/day) PE or placebo capsules. Notably, UM‐B individuals showed the highest baseline cardiovascular risk. After dose‐2, total cholesterol (–15.5 ± 3.7%), LDL‐cholesterol (–14.9 ± 2.1%), small LDL‐cholesterol (–47 ± 7%), non‐HDL‐cholesterol (–11.3 ± 2.5%), apolipoprotein‐B (–12 ± 2.2%), and oxidized LDL‐cholesterol –24 ± 2.5%) dose dependently decreased ( P < 0.05) but only in UM‐B subjects. These effects were partially correlated with urolithin production and the increase in Gordonibacter levels. Three (50%) nonproducers (UM‐0) became producers following PE consumption. Conclusions UM clustering suggests a personalized effect of ellagitannin‐containing foods and could explain the controversial pomegranate benefits. Research on the specific role of urolithins and the microbiota associated with each UM is warranted.
Abstract Today, world energy consumption contributes to pollution, environmental deterioration, and global greenhouse emissions. Increases in energy consumption are driven by population growth and economic development that tend to increase energy use per capita. Thus the inevitable increase in population in the near future and the economic development that must necessarily occur in many countries pose serious implications for the environment. Since the early 1980s the relationship between energy use and environmental impacts has received much attention, and a number of international activities have focused on this topic. In this article, four important aspects that are related to the present and future patterns of environmental impacts, energy consumption, energy conservation, and fuel substitution are introduced and discussed in detail. We conclude that further political, economic, and institutional changes from the standpoint of environmental impacts are necessary for the future energy policies. To this end, renewable energy resources can play an important role in controlling and reducing environmental impact.
This paper provides a review of phthalocyan- ines suitable for the development of chemical sensors. Phthalocyanines may be utilized for different types of chemical sensors, including in particular electronic conductance sensors [such as semiconductive, field-effect transistor (FET), solid-state ionic and capacitance sensors], mass-sensitive sensors utilizing a quartz crystal microbalance (QCM) and surface acoustic-wave (SAW) sensors, and optical sensors. The phthalocyanines used are discussed in terms of their physical and chemical properties, as well as their sensitivity, selectivity and reversibility towards the detection of NO2 and organic solvent vapours. The interaction mechanism between phthalocyanine films and analyte molecules is also discussed.
The synthesis, photophysical and photochemical properties of the 4-({3,4,5-tris-[2-(2-ethoxyethoxy)ethyloxy]benzyl}oxy) and 4-({3,4,5-tris-[2-(2-ethoxyethoxy)ethyloxy]benzyl}thio) zinc(ii) phthalocyanines are reported for the first time. The new compounds have been characterized by elemental analysis, IR, (1)H and (13)C NMR spectroscopy, electronic spectroscopy and mass spectra. General trends are described for photodegradation, singlet oxygen, fluorescence and triplet excited state quantum yields, and triplet state and fluorescence lifetimes of these compounds in dimethylsulfoxide (DMSO). The fluorescence of the complexes was quenched by benzoquinone (BQ). The effects of the substitution on the photophysical and photochemical parameters of the zinc(II) phthalocyanines (6, 7 and 8) are also reported. Photophysical and photochemical properties of phthalocyanine complexes are very useful for PDT applications. The substituted Zn(II) phthalocyanines showed high triplet and singlet oxygen quantum yields. High singlet oxygen quantum yields are very important for Type II mechanism. Thus, these complexes show potential as Type II photosensitizers.
This paper deals with the design methodology for cascaded multilevel converter (CMC)-based transmission-type STATCOM (T-STATCOM) and the development of a ±12 MVAR, 12 kV line-to-line wye-connected, 11-level CMC. Sizing of the CMC module, the number of H-bridges (HBs) in each phase of the CMC, ac voltage rating of the CMC, the number of paralleled CMC modules in the T-STATCOM system, the optimum value of series filter reactors, and the determination of busbar in the power grid to which the T-STATCOM system is going to be connected are also discussed in this paper in view of the IEEE Std. 519-1992, current status of high voltage (HV) insulated gate bipolar transistor (IGBT) technology, and the required reactive power variation range for the T-STATCOM application. In the field prototype of the CMC module, the ac voltages are approximated to sinusoidal waves by the selective harmonic elimination method (SHEM). The equalization of dc-link capacitor voltages is achieved according to the modified selective swapping (MSS) algorithm. In this study, an L-shaped laminated bus has been designed and the HV IGBT driver circuit has been modified for the optimum switching performance of HV IGBT modules in each HB. The laboratory and field performances of the CMC module and of the resulting T-STATCOM system are found to be satisfactory and quite consistent with the design objectives.