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Efficient bit-parallel multi-patterns approximate string matching algorithms

Published in Scientific Research and Essays • Feb 18, 2011
NobleIDNI7P58W69R31S36
Authors:
Rajesh Prasad
,
Anuj Sharma
,
Alok Singh

Abstract

Multi-patterns approximate string matching (MASM) problem is to find all the occurrences of set of patterns P0, P1, P2...Pr-1, r≥1, in the given text T[0…n-1], allowing limited number of errors in the matches. This problem has many applications in computational biology viz. finding DNA subsequences ...

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