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Speeding Hirschberg Algorithm for Sequence Alignment

Published in arXiv (Cornell University) • Apr 27, 2022
NobleIDNI1P19W18R78S14
Authors:
David Llorens
,
Juan Miguel Vilar

Abstract

The use of Hirschberg algorithm reduces the spatial cost of recovering the Longest Common Subsequence to linear space. The same technique can be applied to similar problems like Sequence Alignment. However, the price to pay is a duplication of temporal cost. We present here a technique to reduce thi...

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