github.com/DNAstack/monkeypox-processing-pipeline
Published in Zenodo (CERN European Organization for Nuclear Research) • Sep 8, 2022
NobleIDNI6P58W05R60S57
Authors:
Karen Fang
Abstract
Monkeypox assembly, variant calling, and lineage analysis pipeline This repository contains workflows for processing NCBI SRA monkeypox data from different sequencing platforms including Illumina. The 2022 monkeypox outbreak was declared as a Public Health Emergency of International Concern by the W...
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