Metabarcoding data processing using dada2 - 16S
Published in Zenodo (CERN European Organization for Nuclear Research) • Oct 18, 2023
NobleIDNI6P60W96R53S62
Authors:,,
Callahan McGovern
Davis Fray
Sarah Hamsher
Abstract
Using the code in this file, we will process 16S metabarcoding data using the Dada2 pipeline. (DATA REDUCTION STAGE). Our goal is to use the DADA2 algorithm to assess read quality, denoise, and merge our sequences. Finally, we will assign our sequences to ASVs and assign these to taxonomy using DADA...
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