github.com/sph17/down-sampling/compressCounts
Published in Zenodo (CERN European Organization for Nuclear Research) • Aug 11, 2021
NobleIDNI6P94W29R00S36
Authors:
Stephanie Hao
Abstract
Genome Downsampling Wokflow The genome downsampling workflow consists of downsampling_part1 and downsampling_part2 and executed from Downsample.wdl. The workflow utilizes Samtools, Picard, BWA, GATK, and fastq-tools to randomly down-sample to a desired sequencing coverage. Downsampling_part1: Conver...
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