github.com/gatk-workflows/gatk4-basic-variant-validation/gatk4-basic-variant-validation
Published in Zenodo (CERN European Organization for Nuclear Research) • Nov 4, 2020
Authors:
gatk-workflows
Abstract
gatk4-basic-variant-validation Simple workflow to validate a VCF (or GVCF) -- NOT Best Practices, only for teaching/demo purposes. Inputs and outputs Required inputs One VCF file or GVCF file and its index (can be bgzip/tabix) A list of intervals to process (for parallelization) Genomic resources: r...
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