github.com/phylyc/somatic_workflow/MultiSampleSomaticWorkflow
Published in Zenodo (CERN European Organization for Nuclear Research) • Mar 26, 2024
Authors:,
Philipp Hähnel
Philipp Hähnel
Abstract
Workflow for Somatic Variant Discovery with GATK4+ This repository contains a WDL (Workflow Description Language) workflow for performing multi-sample somatic variant calling using GATK4. The workflow covers preprocessing, single nucleotide variant (SNV) calling, copy number variation (CNV) calling,...
Finding related papers...
Discussions
(0)No comments yet
Be the first to share your thoughts!