Data processing python scripts for GATO-seq analysis
Published in Zenodo (CERN European Organization for Nuclear Research) • Sep 26, 2025
Authors:
Roberto Jareth Vazquez Nunez
Abstract
Original code for GATO-seq data normalization, pause calling, and analysis. Code was produced by Codex (OpenAI) except Sequence_retreiving.ipynp, written by Eugenio Guzman Cerezo. To run the scripts: call_pause_sites.py calls pause sites from GATO-seq data set in bedgraph format python3 call_pause_s...
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