github.com/aofarrel/tree_nine/matUtils_summarize
Published in Zenodo (CERN European Organization for Nuclear Research) • Oct 13, 2025
NobleIDNI5P30W88R80S63
Authors:
Ash O'Farrell
Abstract
Summarize This workflows uses matUtils summarize to get pretty much all data you'd ever need from an UShER-formatted protobuff (.pb) phylogenetic tree. Outputs include: Basic summary Aberrant (-A) Clades (-A) and sample clades (-C) Haplotypes (-H) Mutations (-A) Samples (-A) Roho score (-R)
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