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Python Amber Protein Ligand Complex MD Setup tutorial

Published in WorkflowHub • Jan 1, 2026
NobleIDNI4P24W15R62S27
Authors:
Adam Hospital
,
Genís Bayarri

Abstract

# AMBER Protein MD Setup tutorials using BioExcel Building Blocks (biobb) **Based on the official [GROMACS tutorial](http://www.mdtutorials.com/gmx/lysozyme/index.html).** *** This tutorial aims to illustrate the process of **setting up a simulation** system containing a **protein**, step by step, u...

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