MSuPDA: A Memory Efficient Algorithm for Sequence Alignment.
Published in Interdisciplinary sciences, computational life sciences • Mar 1, 2016
NobleIDNI4P39W73R19S60
Authors:,,
Mohammad Ibrahim Khan
Md Sarwar Kamal
Linkon Chowdhury
Abstract
Space complexity is a million dollar question in DNA sequence alignments. In this regard, memory saving under pushdown automata can help to reduce the occupied spaces in computer memory. Our proposed process is that anchor seed (AS) will be selected from given data set of nucleotide base pairs for l...
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