PyCoTools: a Python toolbox for COPASI

Welsh, Ciaran M; Fullard, Nicola; Proctor, Carole J; Martinez-Guimera, Alvaro; Isfort, Robert J; Bascom, Charles C; Tasseff, Ryan; Przyborski, Stefan A; Shanley, Daryl P

doi:10.1093/bioinformatics/bty409

Public

PyCoTools: a Python toolbox for COPASI.

Published in Bioinformatics (Oxford, England) • Nov 1, 2018

NobleIDNI3P70W17R37S14

Authors:

Ciaran M Welsh

,

Nicola Fullard

,

Carole J Proctor

Abstract

Motivation: COPASI is an open source software package for constructing, simulating and analyzing dynamic models of biochemical networks. COPASI is primarily intended to be used with a graphical user interface but often it is desirable to be able to access COPASI features programmatically, with a hig...

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