Open Source Software Innovations
Top publications in Open Source Software Innovations across the NobleBlocks index. Open any paper for its abstract, citations, and AI-generated take.
Indexed papers
517
Total citations
5.4K
Latest paper
2025
Top papers
QUANTUM ESPRESSO: a modular and open-source software project for quantum simulations of materials
Paolo Giannozzi, Stefano Baroni, Nicola Bonini, Matteo Calandra +29 more
2009· Journal of Physics: Condensed Matter22.4K
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
Patrick D. Schloss, Sarah L. Westcott, Thomas Ryabin, Justine R. Hall +11 more
2009· Applied and Environmental Microbiology18.8K
Gephi: An Open Source Software for Exploring and Manipulating Networks
Mathieu Bastian, Sébastien Heymann, Mathieu Jacomy
2009· Proceedings of the International AAAI Conference on Web and Social Media11.1K
FieldTrip: Open source software for advanced analysis of MEG, EEG, and invasive electrophysiological data.
Robert Oostenveld, Pascal Fries, Eric Maris, Jan-Mathijs Schoffelen
2011· Computational intelligence and neuroscience9.7K
QuPath: Open source software for digital pathology image analysis
Peter Bankhead, Maurice B. Loughrey, José A. Fernández, Yvonne Dombrowski +9 more
2017· Scientific Reports7.8K
<i>GSAS-II</i>: the genesis of a modern open-source all purpose crystallography software package
Brian H. Toby, Robert B. Von Dreele
2013· Journal of Applied Crystallography5.7K
OpenSim: open-source software to create and analyze dynamic simulations of movement.
Scott L Delp, Frank C Anderson, Allison S Arnold, Peter Loan +4 more
2007· IEEE transactions on bio-medical engineering4.5K
Gwyddion: an open-source software for SPM data analysis
David Nečas, Petr Klapetek
2011· Open Physics2.8K
Fiji: an open-source platform for biological-image analysis
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig +12 more
2012· Nature Methods64.6K
EEGLAB: an open source toolbox for analysis of single-trial EEG dynamics including independent component analysis
Arnaud Delorme, Scott Makeig
2004· Journal of Neuroscience Methods22.4K
Bioconductor: open software development for computational biology and bioinformatics.
Robert C Gentleman, Vincent J Carey, Douglas M Bates, Ben Bolstad +21 more
2004· Genome biology12.8K
pROC: an open-source package for R and S+ to analyze and compare ROC curves
Xavier Robin, Natacha Turck, Alexandre Hainard, Natalia Tiberti +3 more
2011· BMC Bioinformatics11.4K
SExtractor: Software for source extraction
E. Bertin, S. Arnouts
1996· Astronomy and Astrophysics Supplement Series10.4K
VSEARCH: a versatile open source tool for metagenomics
Torbjørn Rognes, Tomáš Flouri, Ben Nichols, Christopher Quince +1 more
2016· PeerJ9.3K
EMBOSS: The European Molecular Biology Open Software Suite
Peter Rice, Ian Longden, Alan Bleasby
2000· Trends in Genetics8.3K
GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit
Sander Pronk, Szilárd Páll, Roland Schulz, Per Larsson +8 more
2013· Bioinformatics6.9K
ORB-SLAM2: An Open-Source SLAM System for Monocular, Stereo, and RGB-D Cameras
Raul Mur-Artal, Juan D. Tardos
2017· IEEE Transactions on Robotics5.9K
NWChem: A comprehensive and scalable open-source solution for large scale molecular simulations
Marat Valiev, Eric J. Bylaska, Niranjan Govind, Karol Kowalski +7 more
2010· Computer Physics Communications5.7K
Versatile and open software for comparing large genomes.
Stefan Kurtz, Adam Phillippy, Arthur L Delcher, Michael Smoot +3 more
2004· Genome biology5.2K