National Museum of Ethnology

Human settlement of Oceania marked the culmination of a global colonization process that began when humans first left Africa at least 90,000 years ago. The precise origins and dispersal routes of the Austronesian peoples and the associated Lapita culture remain contentious, and numerous disparate models of dispersal (based primarily on linguistic, genetic, and archeological data) have been proposed. Here, through the use of mtDNA from 781 modern and ancient Sus specimens, we provide evidence for an early human-mediated translocation of the Sulawesi warty pig (Sus celebensis) to Flores and Timor and two later separate human-mediated dispersals of domestic pig (Sus scrofa) through Island Southeast Asia into Oceania. Of the later dispersal routes, one is unequivocally associated with the Neolithic (Lapita) and later Polynesian migrations and links modern and archeological Javan, Sumatran, Wallacean, and Oceanic pigs with mainland Southeast Asian S. scrofa. Archeological and genetic evidence shows these pigs were certainly introduced to islands east of the Wallace Line, including New Guinea, and that so-called "wild" pigs within this region are most likely feral descendants of domestic pigs introduced by early agriculturalists. The other later pig dispersal links mainland East Asian pigs to western Micronesia, Taiwan, and the Philippines. These results provide important data with which to test current models for human dispersal in the region.

A characteristic feature of eukaryote and prokaryote genomes is the co-occurrence of nucleotide substitution and insertion/deletion (indel) mutations. Although similar observations have also been made for chloroplast DNA, genome-wide associations have not been reported. We determined the chloroplast genome sequences for two morphotypes of taro (Colocasia esculenta; family Araceae) and compared these with four publicly available aroid chloroplast genomes. Here, we report the extent of genome-wide association between direct and inverted repeats, indels, and substitutions in these aroid chloroplast genomes. We suggest that alternative but not mutually exclusive hypotheses explain the mutational dynamics of chloroplast genome evolution.

Data from morphology, linguistics, history, and archaeology have all been used to trace the dispersal of chickens from Asian domestication centers to their current global distribution. Each provides a unique perspective which can aid in the reconstruction of prehistory. This study expands on previous investigations by adding a temporal component from ancient DNA and, in some cases, direct dating of bones of individual chickens from a variety of sites in Europe, the Pacific, and the Americas. The results from the ancient DNA analyses of forty-eight archaeologically derived chicken bones provide support for archaeological hypotheses about the prehistoric human transport of chickens. Haplogroup E mtDNA signatures have been amplified from directly dated samples originating in Europe at 1000 B.P. and in the Pacific at 3000 B.P. indicating multiple prehistoric dispersals from a single Asian centre. These two dispersal pathways converged in the Americas where chickens were introduced both by Polynesians and later by Europeans. The results of this study also highlight the inappropriate application of the small stretch of D-loop, traditionally amplified for use in phylogenetic studies, to understanding discrete episodes of chicken translocation in the past. The results of this study lead to the proposal of four hypotheses which will require further scrutiny and rigorous future testing.

UNLABELLED: The treatment of large, advanced osteochondritis dissecans of the elbow is controversial. To ascertain whether better results could be obtained using osteochondral autografts, we retrospectively reviewed the results in 10 young athletes (mean age, 14.3 years; range, 12-17 years) who were followed up for a mean of 25.5 months (range, 18-45 months). After abrasion of the fragments, cylindrical osteochondral bone plugs were transferred from a lateral femoral condyle. They were assessed clinically by the Japanese Orthopaedic Association elbow score and radiologically by radiocapitellar congruity. All patients achieved bony union in 3 months. The average Japanese Orthopaedic Association score was 80.6 points before surgery and improved to 93.8 points at followup. The average percentage of radiocapitellar congruity was 35.7% before surgery and improved to 64.2% at followup. Clinical and radiologic results were excellent in eight patients and poor in two. Poor results may be dependent on preexisting osteoarthritis and technical difficulty related to the location of the lesion. In eight patients, a durable load-bearing elbow was obtained with this procedure, which made hyaline-like cartilage resurfacing with healthy subchondral bony support possible. Osteochondral autograft is a reasonable surgical option for an advanced lesion of osteochondritis dissecans of the elbow, although long-term followup is needed to know whether the early results persist. LEVEL OF EVIDENCE: Therapeutic study, Level IV (case series--no, or historical control group). See the Guidelines for Authors for a complete description of levels of evidence.

Recently, we reported the chloroplast genome-wide association of oligonucleotide repeats, indels and nucleotide substitutions in aroid chloroplast genomes. We hypothesized that the distribution of oligonucleotide repeat sequences in a single representative genome can be used to identify mutational hotspots and loci suitable for population genetic, phylogenetic and phylogeographic studies. Using information on the location of oligonucleotide repeats in the chloroplast genome of taro (Colocasia esculenta), we designed 30 primer pairs to amplify and sequence polymorphic loci. The primers have been tested in a range of intra-specific to intergeneric comparisons, including ten taro samples (Colocasia esculenta) from diverse geographical locations, four other Colocasia species (C. affinis, C. fallax, C. formosana, C. gigantea) and three other aroid genera (represented by Remusatia vivipara, Alocasia brisbanensis and Amorphophallus konjac). Multiple sequence alignments for the intra-specific comparison revealed nucleotide substitutions (point mutations) at all 30 loci and microsatellite polymorphisms at 14 loci. The primer pairs reported here reveal levels of genetic variation suitable for high-resolution phylogeographic and evolutionary studies of taro and other closely related aroids. Our results confirm that information on repeat distribution can be used to identify loci suitable for such studies, and we expect that this approach can be used in other plant groups.

, Araceae) is highly polymorphic with uncertain genetic and geographic origins. We explored chloroplast DNA diversity in cultivated and wild taros, and closely related wild taxa, and found cultivated taro to be polyphyletic, with tropical and temperate clades that appear to originate in Southeast Asia sensu lato. A third clade was found exclusively in wild populations from Southeast Asia to Australia and Papua New Guinea. Our findings do not support the hypothesis of taro domestication in Papua New Guinea, despite archaeological evidence for early use or cultivation there, and the presence of apparently natural wild populations in the region (Australia and Papua New Guinea).

The carbon and nitrogen stable isotopic composition of the scalp hair and diet of Gidra-speaking people in four villages in Papua New Guinea is presented. The isotopic composition of hair was measured, while that of the diet was estimated from food consumption survey data and the measured isotopic composition and protein and carbohydrate contents of food items. The average isotopic ratios of the hair samples and of the diet varied among the four study villages, which were selected because of their diverse ecological settings. Comparison was made between hair and calculated dietary isotopic compositions. Two of the four diet-hair enrichment values obtained for 13C (+1.8 and 2.2%‰) were similar to those previously reported (1.4–2.0%‰), but the other two values (3.7 and 4.8%) were greater than in earlier reports. 15N enrichment was systematically greater (by 1%‰) than reported values (∼4.3%‰) except for one village, where a much greater enrichment (6.9%‰) was found. The factors potentially relevant to these deviations are discussed. Possible errors in estimating the dietary isotopic composition and minor modifications of dietary habits revealed by food consumption surveys could explain most of the discrepancies. However, the great enrichment of 15N found in one of the villages remains unexplained. © 1996 Wiley-Liss, Inc.

Previous research indicates that human genetic diversity in Wallacea-islands in present-day Eastern Indonesia and Timor-Leste that were never part of the Sunda or Sahul continental shelves-has been shaped by complex interactions between migrating Austronesian farmers and indigenous hunter-gatherer communities. Yet, inferences based on present-day groups proved insufficient to disentangle this region's demographic movements and admixture timings. Here, we investigate the spatio-temporal patterns of variation in Wallacea based on genome-wide data from 16 ancient individuals (2600-250 years BP) from the North Moluccas, Sulawesi and East Nusa Tenggara. While ancestry in the northern islands primarily reflects contact between Austronesian- and Papuan-related groups, ancestry in the southern islands reveals additional contributions from Mainland Southeast Asia that seem to predate the arrival of Austronesians. Admixture time estimates further support multiple and/or continuous admixture involving Papuan- and Asian-related groups throughout Wallacea. Our results clarify previously debated times of admixture and suggest that the Neolithic dispersals into Island Southeast Asia are associated with the spread of multiple genetic ancestries.

The Maternal Health Practices and Child Development Project is a longitudinal study of the effects of prenatal exposure to alcohol and other substances. Women were selected from a prenatal clinic and interviewed at the 4th and 7th months of pregnancy. Their offspring were examined at delivery, at 8 and 18 months, and at 3, 6, and 10 years. This report examined 610 offspring, at age 10, who were exposed prenatally to alcohol. Most alcohol use in this low-income cohort was light to moderate, although the entire spectrum of alcohol use is represented. The weight, length, head circumference, and skinfold thickness of the offspring were measured. At each assessment phase, we found a significant association between size and prenatal exposure to alcohol. At age 10, the children who were prenatally exposed to alcohol continued to be significantly smaller in weight, height, head circumference, and skinfold thickness. These results indicate that prenatal alcohol exposure has a long-term impact on offspring growth.

Background: An ethnobotanical study on local cuisine of Sasak tribe in Lombok Island was carried out, as a kind of effort of providing written record of culinary culture in some region of Indonesia. The cuisine studied included meals, snacks, and beverages that have been consumed by Sasak people from generation to generation. Objective: The aims of this study are to explore the local knowledge in utilising and managing plants resources in Sasak cuisine, and to analyze the perceptions and concepts related to food and eating of Sasak people. Methods: Data were collected through direct observation, participatory-observation, interviews and literature review. Results: In total 151 types of consumption were recorded, consisting of 69 meals, 71 snacks, and 11 beverages. These were prepared with 111 plants species belonging to 91 genera and 43 families. Fabaceae contributed the highest number of species to the cuisine. Cocos nucifera had the highest Index of Cultural Significance value and highest number of reported uses. Apparently traditional social and cultural values are still closely associated with Sasak food and eating. Conclusion: Sasak people interpret their food not only as a material for supporting life, but also as a means to maintain a good balance between humans, environment, and spiritual needs.

Societal Impact Statement Using Taro ( Colocasia esculenta ) as a case study, we examine how perception gaps contribute to negative feedback loops that create or maintain the orphan status of certain crops. For students and researchers seeking uncrowded areas for study, orphan crops and crop‐wild‐relatives offer large open spaces, figuratively and literally. Learning how to see what has not been seen may in turn help us to reduce our global dependence on very few crops, and the risks that follow from this. The combination of climate change and variability and increasing population has painted a dark picture of future food security for many regions in the world where resources are scarce. The key to future food and nutrition security may very well lie in unlocking the untapped potential of orphan and overlooked crops. Summary The present distribution of taro ( Colocasia esculenta ), as a cultivated food plant, extends from southern to northern Africa, western Asia to eastern Asia, throughout Southeast Asia and the Pacific Islands, and through the Americas, from the USA to Brazil. Despite its vast geographical range, high nutritional value, and considerable trade as a fresh and processed crop, there has been relatively little interest in taro and its wild relatives among research funding agencies, and little effective or large‐scale assessment of production, trade and usage. Given the proven ability of this crop to grow under diverse climatic regimes, from the equatorial tropics to northern and southern temperate zones it may be useful to consider perception gaps that contribute to disregard of the crop. Here we suggest and discuss a range of perception gaps that together may explain the status of taro as an orphan crop. Perception gaps exist because of many factors: dogma, linguistic diversity, social biases, under‐research, limited physical visibility of living wild populations, poor archaeological visibility, missing production numbers and inaccurate distribution maps. These contributing factors are shared, to lesser or greater extent, by many other orphan crops, but the disjunction between actual utilization (significant) and research effort (minimal) may be greater for taro than for most other “orphans”.

The dynamics of our species’ dispersal into the Pacific remains intensely debated. The authors present archaeological investigations in the Raja Ampat Islands, north-west of New Guinea, that provide the earliest known evidence for humans arriving in the Pacific more than 55 000–50 000 years ago. Seafaring simulations demonstrate that a northern equatorial route into New Guinea via the Raja Ampat Islands was a viable dispersal corridor to Sahul at this time. Analysis of faunal remains and a resin artefact further indicates that exploitation of both rainforest and marine resources, rather than a purely maritime specialisation, was important for the adaptive success of Pacific peoples.

Chloroplast (cp) genomes are considered important for the study of lineage-specific molecular evolution, population genetics, and phylogenetics. Our aim here was to elucidate the molecular evolution in cp genomes of species in the Dracunculus clade (Aroideae, Araceae). We report de novo assembled cp genomes for eight species from eight genera and also retrieved cp genomes of four species from the National Center for Biotechnology Information (NCBI). The cp genomes varied in size from 162,424 bp to 176,835 bp. Large Single Copy (LSC) region ranged in size from 87,141 bp to 95,475 bp; Small Single Copy (SSC) from 14,338 bp to 23,981 bp; and Inverted Repeats (IRa and IRb) from 25,131 bp to 32,708 bp. The expansion in inverted repeats led to duplication of ycf1 genes in four species. The genera showed high similarity in gene content and yielded 113 unique genes (79 protein-coding, 4 rRNA, and 30 tRNA genes). Codon usage, amino acid frequency, RNA editing sites, microsatellites repeats, transition and transversion substitutions, and synonymous and non-synonymous substitutions were also similar across the clade. A previous study reported deletion of ycf1, accD, psbE, trnL-CAA, and trnG-GCC genes in four Amorphophallus species. Our study supports conservative structure of cp genomes in the Dracunculus clade including Amorphophallus species and does not support gene deletion mentioned above. We also report suitable polymorphic loci based on comparative analyses of Dracunculus clade species, which could be useful for phylogenetic inference. Overall, the current study broad our knowledge about the molecular evolution of chloroplast genome in aroids.

Hair and mercury concentrations of 134 fish-eating subjects in the Lake Murray area and 13 non-fish-eating subjects in the upper-Strickland area, Papua New Guinea, were studied. Hair mercury levels among the subjects in the Lake Murray area (mean = 21.9 micrograms/g, range = 3.7-71.9 micrograms/g) and urinary mercury levels (mean = 7.6 micrograms/g creatinine, range = 1.4-25.6 micrograms/g creatinine) were markedly higher than levels found in subjects from the upper-Strickland area (mean hair mercury = 0.75 micrograms/g, mean urinary mercury = 0.48 micrograms/g creatinine). Mercury intake of the fish eaters, estimated from mercury concentrations found in fish and from the observed amounts of fish consumed, was approximately 73 micrograms/d. Hair and urinary mercury concentrations were correlated significantly (r = .59), indicating that urinary mercury excretion was elevated because fish consumption was very high.

Abstract Previous research indicates that the human genetic diversity found in Wallacea - islands in present-day Eastern Indonesia and Timor-Leste that were never part of the Sunda or Sahul continental shelves - has been shaped by complex interactions between migrating Austronesian farmers and indigenous hunter-gatherer communities. Here, we provide new insights into this region’s demographic history based on genome-wide data from 16 ancient individuals (2600-250 yrs BP) from islands of the North Moluccas, Sulawesi, and East Nusa Tenggara. While the ancestry of individuals from the northern islands fit earlier views of contact between groups related to the Austronesian expansion and the first colonization of Sahul, the ancestry of individuals from the southern islands revealed additional contributions from Mainland Southeast Asia, which seems to predate the Austronesian admixture in the region. Admixture time estimates for the oldest individuals of Wallacea are closer to archaeological estimates for the Austronesian arrival into the region than are admixture time estimates for present-day groups. The decreasing trend in admixture times exhibited by younger individuals supports a scenario of multiple or continuous admixture involving Papuan- and Asian-related groups. Our results clarify previously debated times of admixture and suggest that the Neolithic dispersals into Island Southeast Asia are associated with the spread of multiple genetic ancestries.

Significance Fossil evidence shows that Polynesians introduced the tropical crop taro ( Colocasia esculenta ) during initial colonization of the subtropical South Pacific islands and temperate New Zealand after 1200 CE, establishing garden ecosystems with similar commensal plants and invertebrates. Sedimentary charcoal and fossil remains indicate how frequent burning and perennial cultivation overcame the ecological constraints for taro production, particularly the temperate forest cover of New Zealand. An increase in short-lived plants, indicating a transition toward higher-intensity production, followed rapid woody forest decline and species extinctions on all islands. The relatively recent fossil records from the subtropical and temperate islands of Polynesia provide unique insights into the ecological processes behind the spread of Neolithic crops into areas marginal for production.

Expedient lithic technology has been described as unchanging and without or very limited presence of formal tool types. However, this premise seems to limit the discussion on technological and behavioural complexity when studying amorphous flake industries. To address this issue, we employed multi-stage use-wear analysis to identify features that are not detectable through macroscopic approach. Our analysis of chert tools from Leang Sarru, North Sulawesi indicated the use of both unmodified flakes and retouched tools for plant processing, and we detected evidence for the manufacture of composite tools. Microscopic wear traces on unretouched flakes show that these were attached to shafts for possible use as hafted tools, but not necessarily as projectiles. Our results suggest that simple flake assemblages can be part of complex tool production and present an alternative view on the seemingly unchanging lithic technology from the Late Pleistocene to the Holocene. Furthermore, our current understanding of expedient lithic technology should be reassessed as features that are not observable with standard morphological and technological analyses may be detected through use-wear analysis. Overall, the applied methodology and results of this study are relevant to Pleistocene and Early Holocene archaeological sites and assemblages that exhibit the dilemma of inferring technological and behavioural complexity through the analysis of simple stone tools.

To define a hypermedia system's ease of use from the user's point of view, we propose three evaluation metrics: an interface shallowness metric, a downward compactness metric, and a downward navigability metric. These express both the cognitive load on users and the structural complexity of the hypermedia contents. We conducted a field study at the National Museum of Ethnology (NME) in Osaka, Japan, to evaluate our hypermedia system and to assess the suitability of our hypermedia metrics from the viewpoint of visiting members of the public. After developing a spreadsheet-type authoring system named HyperEX, we built prototype systems for use by members of the public visiting a special exhibition held at the museum. Questionnaires, interviews, automatic recording of users' navigation operations, and statistical analysis of 449 tested users yielded the following results. First, the suitability of the metrics was found to be satisfactory, indicating that they are useful for developing hypermedia systems. Second, there is a strong relationship between a system's enjoyability and its usability. Transparency and the friendliness of the user interface are the key issues in enjoyability. Finally, the quality of the video strongly affects the overall system evaluation. Video quality is determined by optimum selection of scenes, the length of the video, and appropriate audio-visual expression of the content. This video quality may become the most important issue in developing hypermedia for museum education.

BACKGROUND: Paper mulberry (Broussonetia papyrifera (L.) L'Hér. ex Vent) is a dioecious tree native to East Asia and mainland Southeast-Asia, introduced prehistorically to Polynesia as a source of bark fiber by Austronesian-speaking voyagers. In Oceania, trees are coppiced and harvested for production of bark-cloth, so flowering is generally unknown. A survey of botanical records of paper mulberry revealed a distributional disjunction: the tree is apparently absent in Borneo and the Philippines. A subsequent study of chloroplast haplotypes linked paper mulberry of Remote Oceania directly to a population in southern Taiwan, distinct from known populations in mainland Southeast-Asia. METHODOLOGY: We describe the optimization and use of a DNA marker designed to identify sex in paper mulberry. We used this marker to determine the sex distribution in selected localities across Asia, Near and Remote Oceania. We also characterized all samples using the ribosomal internal transcribed spacer sequence (ITS) in order to relate results to a previous survey of ITS diversity. RESULTS: In Near and Remote Oceania, contemporary paper mulberry plants are all female with the exception of Hawaii, where plants of both sexes are found. In its natural range in Asia, male and female plants are found, as expected. Male plants in Hawaii display an East Asian ITS genotype, consistent with modern introduction, while females in Remote Oceania share a distinctive variant. CONCLUSIONS: Most paper mulberry plants now present in the Pacific appear to be descended from female clones introduced prehistorically. In Hawaii, the presence of male and female plants is thought to reflect a dual origin, one a prehistoric female introduction and the other a modern male introduction by Japanese/Chinese immigrants. If only female clones were dispersed from a source-region in Taiwan, this may explain the absence of botanical records and breeding populations in the Philippines and Borneo, and Remote Oceania.

(2004). The Museum and the Intangible Cultural Heritage. Museum International: Vol. 56, No. 1-2, pp. 108-112.