Observatoire des Sciences de l'Univers de la Réunion

Free radicals are a normal component of cellular oxygen metabolism in mammals. However, free radical-associated damage is an important factor in many pathological processes. Glycation and oxidative damage cause protein modifications, frequently observed in numerous diseases. Albumin represents a very abundant and important circulating antioxidant. This review brings together recent insights on albumin antioxidant properties. First, it focuses on the different activities of albumin concerning protein antioxidation. In particular, we describe the role of albumin in ligand binding and free radical-trapping activities. In addition, physiological and pathological situations that modify the antioxidant properties of albumin are reported.

BACKGROUND: Chikungunya is a reemerging disease. In 2005-2006, a severe outbreak occurred on Reunion Island in the southwestern part of the Indian Ocean. Other islands in this area were affected during the same period. METHODS: Adult patients with acute chikungunya (defined as onset of fever and/or polyarthralgia in the 5 days preceding consultation) and laboratory-confirmed chikungunya who were referred to Groupe Hospitalier Sud Reunion during the period from March 2005 through April 2006 were included in this retrospective study. Their clinical and laboratory features are reported. RESULTS: Laboratory-confirmed acute chikungunya was documented in 157 patients. The mean age of patients was 57.9 years, and the ratio of male to female patients was 1.24 : 1. Sixty percent of patients had at least 1 comorbidity. Ninety-seven patients (61.8%) were hospitalized, and 60 (38.2%) were treated as outpatients. Five fatalities were reported. One hundred fifty-one patients (96.1%) experienced polyarthralgia, and 129 (89%) experienced fever. Gastrointestinal symptoms were reported by 74 patients (47.1%), and skin rash was reported by 63 (40.1%). Hemorrhagic signs were rare. Lymphopenia and hypocalcemia were the prominent laboratory findings. Severe thrombocytopenia was rarely observed. CONCLUSIONS: Chikungunya virus can be responsible for explosive outbreaks of disease. Polyarthralgia and fever are the 2 main clinical features. In this era of travel and globalization, chikungunya should be considered in the differential diagnosis of febrile polyarthralgia with an abrupt onset.

Abstract Worldwide, most sea cucumber fisheries are ineffectively managed, leading to declining stocks and potentially eroding the resilience of fisheries. We analyse trends in catches, fishery status, fishing participation and regulatory measures among 77 sea cucumber fisheries through data from recent fishery reports and fishery managers. Critical gaps in fisheries biology knowledge of even commonly targeted species undermine the expected success of management strategies. Most tropical fisheries are small‐scale, older and typified by numerous (>8) species, whereas temperate fisheries are often emerging, mono‐specific and industrialized. Fisher participation data indicated about 3 million sea cucumber fishers worldwide. Fisher participation rates were significantly related to the average annual yield. permanova analysis showed that over‐exploited and depleted fisheries employed different sets of measures than fisheries with healthier stocks, and a non‐metric multidimensional scaling ordination illustrated that a broad set of regulatory measures typified sustainable fisheries. SIMPER and regression tree analyses identified that the dissimilarity was most related to enforcement capacity, number of species harvested, fleet (vessel) controls, limited entry controls and rotational closures. The national Human Development Index was significantly lower in countries with over‐exploited and depleted fisheries. Where possible, managers should limit the number of fishers and vessel size and establish short lists of permissible commercial species in multispecies fisheries. Our findings emphasize an imperative to support the enforcement capacity in low‐income countries, in which risk of biodiversity loss is exceptionally high. Solutions for greater resilience of sea cucumber stocks must be embedded within those for poverty reduction and alternative livelihood options.

A network of 10 southern hemisphere tropical and subtropical stations, designated the Southern Hemisphere Additional Ozonesondes (SHADOZ) project and established from operational sites, provided over 1000 ozone profiles during the period 1998–2000. Balloon‐borne electrochemical concentration cell (ECC) ozonesondes, combined with standard radiosondes for pressure, temperature, and relative humidity measurements, collected profiles in the troposphere and lower to midstratosphere at: Ascension Island; Nairobi, Kenya; Irene, South Africa; Réunion Island; Watukosek, Java; Fiji; Tahiti; American Samoa; San Cristóbal, Galapagos; and Natal, Brazil. The archived data are available at: 〈 http://croc.gsfc.nasa.gov/shadoz 〉. 1 In this paper, uncertainties and accuracies within the SHADOZ ozone data set are evaluated by analyzing: (1) imprecisions in profiles and in methods of extrapolating ozone above balloon burst; (2) comparisons of column‐integrated total ozone from sondes with total ozone from the Earth‐Probe/Total Ozone Mapping Spectrometer (TOMS) satellite and ground‐based instruments; and (3) possible biases from station to station due to variations in ozonesonde characteristics. The key results are the following: (1) Ozonesonde precision is 5%. (2) Integrated total ozone column amounts from the sondes are usually to within 5% of independent measurements from ground‐based instruments at five SHADOZ sites and overpass measurements from the TOMS satellite (version 7 data). (3) Systematic variations in TOMS‐sonde offsets and in ground‐based‐sonde offsets from station to station reflect biases in sonde technique as well as in satellite retrieval. Discrepancies are present in both stratospheric and tropospheric ozone. (4) There is evidence for a zonal wave‐one pattern in total and tropospheric ozone, but not in stratospheric ozone.

Abstract Aim Higher‐elevation areas on islands and continental mountains tend to be separated by longer distances, predicting higher endemism at higher elevations; our study is the first to test the generality of the predicted pattern. We also compare it empirically with contrasting expectations from hypotheses invoking higher speciation with area, temperature and species richness. Location Thirty‐two insular and 18 continental elevational gradients from around the world. Methods We compiled entire floras with elevation‐specific occurrence information, and calculated the proportion of native species that are endemic (‘percent endemism’) in 100‐m bands, for each of the 50 elevational gradients. Using generalized linear models, we tested the relationships between percent endemism and elevation, isolation, temperature, area and species richness. Results Percent endemism consistently increased monotonically with elevation, globally. This was independent of richness–elevation relationships, which had varying shapes but decreased with elevation at high elevations. The endemism–elevation relationships were consistent with isolation‐related predictions, but inconsistent with hypotheses related to area, richness and temperature. Main conclusions Higher per‐species speciation rates caused by increasing isolation with elevation are the most plausible and parsimonious explanation for the globally consistent pattern of higher endemism at higher elevations that we identify. We suggest that topography‐driven isolation increases speciation rates in mountainous areas, across all elevations and increasingly towards the equator. If so, it represents a mechanism that may contribute to generating latitudinal diversity gradients in a way that is consistent with both present‐day and palaeontological evidence.

Difficulties in scaling up theoretical and experimental results have raised controversy over the consequences of biodiversity loss for the functioning of natural ecosystems. Using a global survey of reef fish assemblages, we show that in contrast to previous theoretical and experimental studies, ecosystem functioning (as measured by standing biomass) scales in a non-saturating manner with biodiversity (as measured by species and functional richness) in this ecosystem. Our field study also shows a significant and negative interaction between human population density and biodiversity on ecosystem functioning (i.e., for the same human density there were larger reductions in standing biomass at more diverse reefs). Human effects were found to be related to fishing, coastal development, and land use stressors, and currently affect over 75% of the world's coral reefs. Our results indicate that the consequences of biodiversity loss in coral reefs have been considerably underestimated based on existing knowledge and that reef fish assemblages, particularly the most diverse, are greatly vulnerable to the expansion and intensity of anthropogenic stressors in coastal areas.

Abstract. This paper presents the Meso-NH model version 5.4. Meso-NH is an atmospheric non hydrostatic research model that is applied to a broad range of resolutions, from synoptic to turbulent scales, and is designed for studies of physics and chemistry. It is a limited-area model employing advanced numerical techniques, including monotonic advection schemes for scalar transport and fourth-order centered or odd-order WENO advection schemes for momentum. The model includes state-of-the-art physics parameterization schemes that are important to represent convective-scale phenomena and turbulent eddies, as well as flows at larger scales. In addition, Meso-NH has been expanded to provide capabilities for a range of Earth system prediction applications such as chemistry and aerosols, electricity and lightning, hydrology, wildland fires, volcanic eruptions, and cyclones with ocean coupling. Here, we present the main innovations to the dynamics and physics of the code since the pioneer paper of Lafore et al. (1998) and provide an overview of recent applications and couplings.

COVID-19 is caused by the coronavirus SARS-CoV-2, which jumped into the human population in late 2019 from a currently uncharacterised animal reservoir. Due to this recent association with humans, SARS-CoV-2 may not yet be fully adapted to its human host. This has led to speculations that SARS-CoV-2 may be evolving towards higher transmissibility. The most plausible mutations under putative natural selection are those which have emerged repeatedly and independently (homoplasies). Here, we formally test whether any homoplasies observed in SARS-CoV-2 to date are significantly associated with increased viral transmission. To do so, we develop a phylogenetic index to quantify the relative number of descendants in sister clades with and without a specific allele. We apply this index to a curated set of recurrent mutations identified within a dataset of 46,723 SARS-CoV-2 genomes isolated from patients worldwide. We do not identify a single recurrent mutation in this set convincingly associated with increased viral transmission. Instead, recurrent mutations currently in circulation appear to be evolutionary neutral and primarily induced by the human immune system via RNA editing, rather than being signatures of adaptation. At this stage we find no evidence for significantly more transmissible lineages of SARS-CoV-2 due to recurrent mutations.

A field study of coral bleaching and coral communities was undertaken spanning 8 countries and ~35of latitude in 2005. This was combined with studies in southern Kenya and northeast Madagascar in 1998 and Mauritius in 2004 to develop a synoptic analysis of coral community structure, bleaching response, susceptibility of the communities to bleaching, and the relative risk of extinctions in western Indian Ocean coral reefs. Cluster analysis identified 8 distinct coral communities among the 91 sites sampled, with 2 distinct communities in northern South Africa and central Mozambique, a third in the central atolls of the Maldives, and 5 less differentiated groups, in a swath from southern Kenya to Mauritius, including Tanzania, the granitic islands of the Seychelles, northeast Madagascar, and Runion. Massive Porites, Pavona, and Pocillopora dominated the central and northern Indian Ocean sites and, from historical records, replaced dominance by Acropora and Montipora. From southern Kenya to Mauritius, coral communities were less disturbed, with Acropora and Montipora dominating, and a mix of subdominants including branching Porites, Fungia, Galaxea, massive Porites, Pocillopora, and Synarea. The survey identified an area from southernmost Kenya to Tanzania as having the least disturbed and highest diversity reefs, and as being a regional priority for management. Taxa vulnerable to future extinction based on their response to warm water, population density, and commonness include largely low-diversity genera with narrow environmental ranges, such as Gyrosmilia interrupta, Plesiastrea versipora, Plerogyra sinuosa, and Physogyra lichtensteini.

To the Editor: A serious outbreak of chikungunya disease recently occurred on Reunion Island (population 770,000) (1).

The first view of stratospheric and tropospheric ozone variability in the Southern Hemisphere tropics is provided by a 3‐year record of ozone soundings from the Southern Hemisphere Additional Ozonesondes (SHADOZ) network ( http://croc.gsfc.nasa.gov/shadoz ). Observations covering 1998–2000 were made over Ascension Island, Nairobi (Kenya), Irene (South Africa), Réunion Island, Watukosek (Java), Fiji, Tahiti, American Samoa, San Cristóbal (Galapagos), and Natal (Brazil). Total, stratospheric, and tropospheric column ozone amounts usually peak between August and November. Other features are a persistent zonal wave‐one pattern in total column ozone and signatures of the quasi‐biennial oscillation (QBO) in stratospheric ozone. The wave‐one is due to a greater concentration of free tropospheric ozone over the tropical Atlantic than the Pacific and appears to be associated with tropical general circulation and seasonal pollution from biomass burning. Tropospheric ozone over the Indian and Pacific Oceans displays influences of the waning 1997–1998 El Niño, seasonal convection, and pollution transport from Africa. The most distinctive feature of SHADOZ tropospheric ozone is variability in the data, e.g., a factor of 3 in column amount at 8 of 10 stations. Seasonal and monthly means may not be robust quantities because statistics are frequently not Gaussian even at sites that are always in tropical air. Models and satellite retrievals should be evaluated on their capability for reproducing tropospheric variability and fine structure. A 1999–2000 ozone record from Paramaribo, Surinam (6°N, 55°W) (also in SHADOZ) shows a marked contrast to southern tropical ozone because Surinam is often north of the Intertropical Convergence Zone (ITCZ). A more representative tropospheric ozone climatology for models and satellite retrievals requires additional Northern Hemisphere tropical data.

The controversial topic of synthetic dyes in food has been discussed for many years. The scrutiny and negative assessment of synthetic food dyes by the modern consumer have raised a strong interest in natural colouring alternatives. Nature is rich in colours (minerals, plants, microalgae, etc.), and pigment-producing microorganisms (fungi, yeasts, bacteria) are quite common. Among the molecules produced by microorganisms are carotenoids, melanins, flavins, quinones, and more specifically monascins, violacein or indigo. The success of any pigment produced by fermentation depends upon its acceptability on the market, regulatory approval, and the size of the capital investment required to bring the product to market. A few years ago, some expressed doubts about the successful commercialization of fermentation-derived food grade pigments because of the high capital investment requirements for fermentation facilities and the extensive and lengthy toxicity studies required by regulatory agencies. Public perception of biotechnology-derived products also had to be taken into account. Nowadays some fermentative food grade pigments are on the market: Monascus pigments, astaxanthin from Xanthophyllomyces dendrorhous, Arpink Red from Penicillium oxalicum, riboflavin from Ashbya gossypii, b-carotene from Blakeslea trispora. The successful marketing of pigments derived from algae or extracted from plants, both as a food colour and a nutritional supplement, reflects the presence and importance of niche markets in which consumers are willing to pay a premium for »all natural ingredients«.

Core Ideas OZCAR is a network of sites studying the critical zone. OZCAR covers various disciplines. OZCAR will help disciplines to work together for a better representation and modeling of the critical zone. The French critical zone initiative, called OZCAR (Observatoires de la Zone Critique–Application et Recherche or Critical Zone Observatories–Application and Research) is a National Research Infrastructure (RI). OZCAR‐RI is a network of instrumented sites, bringing together 21 pre‐existing research observatories monitoring different compartments of the zone situated between “the rock and the sky,” the Earth's skin or critical zone (CZ), over the long term. These observatories are regionally based and have specific initial scientific questions, monitoring strategies, databases, and modeling activities. The diversity of OZCAR‐RI observatories and sites is well representative of the heterogeneity of the CZ and of the scientific communities studying it. Despite this diversity, all OZCAR‐RI sites share a main overarching mandate, which is to monitor, understand, and predict (“earthcast”) the fluxes of water and matter of the Earth's near surface and how they will change in response to the “new climatic regime.” The vision for OZCAR strategic development aims at designing an open infrastructure, building a national CZ community able to share a systemic representation of the CZ, and educating a new generation of scientists more apt to tackle the wicked problem of the Anthropocene. OZCAR articulates around: (i) a set of common scientific questions and cross‐cutting scientific activities using the wealth of OZCAR‐RI observatories, (ii) an ambitious instrumental development program, and (iii) a better interaction between data and models to integrate the different time and spatial scales. Internationally, OZCAR‐RI aims at strengthening the CZ community by providing a model of organization for pre‐existing observatories and by offering CZ instrumented sites. OZCAR is one of two French mirrors of the European Strategy Forum on Research Infrastructure (eLTER‐ESFRI) project.

Recent clinical trial data suggest a cardiorenal protective effect of sodium glucose cotransporter 2 (SGLT2) inhibition. We demonstrate that chemical denervation in neurogenic hypertensive Schlager (BPH/2J) mice reduced blood pressure, improved glucose homeostasis, and reduced renal SGLT2 protein expression. Inhibition of SGLT2 prevented weight gain, reduced blood pressure, significantly reduced elevations of tyrosine hydroxylase and norepinephrine, and protects against endothelial dysfunction. These findings provide evidence for significant crosstalk between activation of the sympathetic nervous system and SGLT2 regulation and possible ancillary effects on endothelial function, which may contribute to the observed cardiorenal protective effects of SGLT2 inhibition.

Seven cane brown sugars (four from La Réunion, two from Mauritius, and one from France) were investigated for their polyphenol content and volatile composition in relation to their free radical scavenging capacity determined by ABTS and DPPH assays. The thin layer coated on the sugar crystal was extracted by Soxhlet extractor with dichloromethane. The volatile compounds of brown sugars were studied by GC-MS, and 43 compounds were identified. The total phenolic content of brown sugars was determined according to the Folin-Ciocalteu method. Phenolic compounds were quantified in the brown sugar extracts by LC-UV-ESI-MS. Brown sugar aqueous solutions exhibited weak free radical scavenging activity in the DPPH assay and higher antioxidant activity in the ABTS assay at relatively high concentration. The brown sugar extracts showed interesting free radical scavenging properties despite the low concentration of phenolic and volatile compounds. Sugar is a common foodstuff traditionally used for its sweetening properties, which might be accompanied by antioxidant properties arising from molecules (polyphenols, Maillard products) other than sucrose of the cane brown sugars.

Determining patterns of host use, and the frequency at which these patterns change, are of key importance if we are to understand tick population dynamics, the evolution of tick biodiversity, and the circulation and evolution of associated pathogens. The question of whether ticks are typically host specialists or host generalists has been subject to much debate over the last half-century. Indeed, early research proposed that morphological diversity in ticks was linked to host specific adaptations and that most ticks were specialists. Later work disputed this idea and suggested that ticks are largely limited by biogeographic conditions and tend to use all locally available host species. The work presented in this review suggests that the actual answer likely lies somewhere between these two extremes. Although recent observational studies support the view that phylogenetically diverse host species share ticks when found on similar ecological ranges, theory on host range evolution predicts that host specialization should evolve in ticks given their life history characteristics. Contemporary work employing population genetic tools to examine host-associated population structure in several tick systems support this prediction and show that simple species records are not enough to determine whether a parasite is a true host generalist; host specialization does evolve in ticks at local scales, but may not always lead to speciation. Ticks therefore seem to follow a pattern of being global generalists, local specialists. Given this, the notion of host range needs to be modified from an evolutionary perspective, where one simply counts the number of hosts used across the geographic distribution, to a more ecological view, where one considers host use at a local scale, if we are to better understand the circulation of tick-borne pathogens and exposure risks for humans and livestock.

Abstract Extraction experiments with hexane were carried out at atmospheric pressure in Soxhlet, conventional and ultrasound extractions of flaked caraway seeds, and detailed results are given for two major plant extract components, carvone and limonene. The results indicate that carvone yield and plant extract quality are better in ultrasound extraction compared to those given by conventional methodology. Extraction rates of carvone and limonene reported that ultrasound‐assisted extraction was 1.3–2 times more rapid, depending on temperature, than a conventional system, according to the rate constant obtained during the initial 10 minutes of extraction. Moreover, the SEM micrographs provided more evidence for the mechanical effects of ultrasound, mainly appearing on cell walls and shown by the destruction of cells, faulitating the release of their contents, in contrast to conventional maceration or extraction, which involve diffusion of plant extracts across glandular walls and causing cell rupture over longer time periods. Copyright © 2004 John Wiley & Sons, Ltd.

Abstract Piton de la Fournaise (Réunion, Indian Ocean) is a large active volcano which shares many features with the Hawaiian volcanoes. Its particularly simple elemental and isotopic geochemistry suggests, however, a rather homogeneous mantle source and makes this volcano ideally suited for petrogenetic studies. We report mineralogical descriptions, major element, trace element and Sr isotope compositions of four volcanic sequences spanning the 530 ka of the known lifetime of the volcano. The lavas change with time from mildly alkalic to mildly tholeiitic. This change is due to crystal fractionation becoming shallower with time as olivine replaces clinopyroxene as the liquidus phase at lower pressure. Fractionation of an olivine–clinopyroxene assemblage at lithospheric-mantle pressure drives tholeiitic basalts into the field of alkali basalts and puts some limitation on trace-element modelling of the melting process. Most Fournaise lavas are basalts with a narrow compositional range (steady-state basalts) and picrites containing common plastically deformed phenocrysts. The buffering of the compatible element compositions indicates that the lavas last equilibrated in solid-dominant conditions which are incompatible with magma chamber processes and may have resulted from the ascent of liquid-rich zones through dykes filled with a slurry of olivine ± clinopyroxene crystals. A quantitative model describing mass balance during the displacement of a solitary porosity wave leaving behind cumulates with residual porosity accounts for the major and trace element distributions.The dykes are flushed during major magma surges forming picritic slurries (= oceanites). The transient alkalic lavas are products of dynamic crystallization on cold dyke walls during times of lower magma fluxes. The total lifetime of a Réunion volcano (≥ 2.1 my) includes early and waning stages with alkalic activity bracketing a steady-state stage of tholeiitic activity. We estimate that Réunion volcanism results from the impingement on the base of lithosphere of a solitary wave of hotspot material with a radius of 100–130 km and a velocity of 5–9 cm/yr.

Diversity in coral reef fishes is not evenly distributed and tends to accumulate in the Indo-Malay-Philippines Archipelago (IMPA). The comprehension of the mechanisms that initiated this pattern is in its infancy despite its importance for the conservation of coral reefs. Considering the IMPA either as an area of overlap or a cradle of marine biodiversity, the hypotheses proposed to account for this pattern rely on extant knowledge about taxonomy and species range distribution. The recent large-scale use of standard molecular data (DNA barcoding), however, has revealed the importance of taking into account cryptic diversity when assessing tropical biodiversity. We DNA barcoded 2276 specimens belonging to 668 coral reef fish species through a collaborative effort conducted concomitantly in both Indian and Pacific oceans to appraise the importance of cryptic diversity in species with an Indo-Pacific distribution range. Of the 141 species sampled on each side of the IMPA, 62 presented no spatial structure whereas 67 exhibited divergent lineages on each side of the IMPA with K2P distances ranging between 1% and 12%, and 12 presented several lineages with K2P distances ranging between 3% and 22%. Thus, from this initial pool of 141 nominal species with Indo-Pacific distribution, 79 dissolved into 165 biological units among which 162 were found in a single ocean. This result is consistent with the view that the IMPA accumulates diversity as a consequence of its geological history, its location on the junction between the two main tropical oceans and the presence of a land bridge during glacial times in the IMPA that fostered allopatric divergence and secondary contacts between the Indian and Pacific oceans.

Abstract Aim Many Australian Acacia species have been planted around the world, some are highly valued, some are invasive, and some are both highly valued and invasive. We review global efforts to minimize the risk and limit the impact of invasions in this widely used plant group. Location Global. Methods Using information from literature sources, knowledge and experience of the authors, and the responses from a questionnaire sent to experts around the world, we reviewed: (1) a generalized life cycle of Australian acacias and how to control each life stage, (2) different management approaches and (3) what is required to help limit or prevent invasions. Results Relatively few Australian acacias have been introduced in large numbers, but all species with a long and extensive history of planting have become invasive somewhere. Australian acacias, as a group, have a high risk of becoming invasive and causing significant impacts as determined by existing assessment schemes. Moreover, in most situations, long‐lived seed banks mean it is very difficult to control established infestations. Control has focused almost exclusively on widespread invaders, and eradication has rarely been attempted. Classical biological control is being used in South Africa with increasing success. Main conclusions A greater emphasis on pro‐active rather than reactive management is required given the difficulties managing established invasions of Australian acacias. Adverse effects of proposed new introductions can be minimized by conducting detailed risk assessments in advance, planning for on‐going monitoring and management, and ensuring resources are in place for long‐term mitigation. Benign alternatives (e.g. sterile hybrids) could be developed to replace existing utilized taxa. Eradication should be set as a management goal more often to reduce the invasion debt. Introducing classical biological control agents that have a successful track‐record in South Africa to other regions and identifying new agents (notably vegetative feeders) can help mitigate existing widespread invasions. Trans‐boundary sharing of information will assist efforts to limit future invasions, in particular, management strategies need to be better evaluated, monitored, published and publicised so that global best‐practice procedures can be developed.