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Free-flowing rivers (FFRs) support diverse, complex and dynamic ecosystems globally, providing important societal and economic services. Infrastructure development threatens the ecosystem processes, biodiversity and services that these rivers support. Here we assess the connectivity status of 12 million kilometres of rivers globally and identify those that remain free-flowing in their entire length. Only 37 per cent of rivers longer than 1,000 kilometres remain free-flowing over their entire length and 23 per cent flow uninterrupted to the ocean. Very long FFRs are largely restricted to remote regions of the Arctic and of the Amazon and Congo basins. In densely populated areas only few very long rivers remain free-flowing, such as the Irrawaddy and Salween. Dams and reservoirs and their up- and downstream propagation of fragmentation and flow regulation are the leading contributors to the loss of river connectivity. By applying a new method to quantify riverine connectivity and map FFRs, we provide a foundation for concerted global and national strategies to maintain or restore them.

Assessing Biodiversity Declines Understanding human impact on biodiversity depends on sound quantitative projection. Pereira et al. (p. 1496 , published online 26 October) review quantitative scenarios that have been developed for four main areas of concern: species extinctions, species abundances and community structure, habitat loss and degradation, and shifts in the distribution of species and biomes. Declines in biodiversity are projected for the whole of the 21st century in all scenarios, but with a wide range of variation. Hoffmann et al. (p. 1503 , published online 26 October) draw on the results of five decades' worth of data collection, managed by the International Union for Conservation of Nature Species Survival Commission. A comprehensive synthesis of the conservation status of the world's vertebrates, based on an analysis of 25,780 species (approximately half of total vertebrate diversity), is presented: Approximately 20% of all vertebrate species are at risk of extinction in the wild, and 11% of threatened birds and 17% of threatened mammals have moved closer to extinction over time. Despite these trends, overall declines would have been significantly worse in the absence of conservation actions.

Our ability to predict the identity of future invasive alien species is largely based upon knowledge of prior invasion history. Emerging alien species-those never encountered as aliens before-therefore pose a significant challenge to biosecurity interventions worldwide. Understanding their temporal trends, origins, and the drivers of their spread is pivotal to improving prevention and risk assessment tools. Here, we use a database of 45,984 first records of 16,019 established alien species to investigate the temporal dynamics of occurrences of emerging alien species worldwide. Even after many centuries of invasions the rate of emergence of new alien species is still high: One-quarter of first records during 2000-2005 were of species that had not been previously recorded anywhere as alien, though with large variation across taxa. Model results show that the high proportion of emerging alien species cannot be solely explained by increases in well-known drivers such as the amount of imported commodities from historically important source regions. Instead, these dynamics reflect the incorporation of new regions into the pool of potential alien species, likely as a consequence of expanding trade networks and environmental change. This process compensates for the depletion of the historically important source species pool through successive invasions. We estimate that 1-16% of all species on Earth, depending on the taxonomic group, qualify as potential alien species. These results suggest that there remains a high proportion of emerging alien species we have yet to encounter, with future impacts that are difficult to predict.

BACKGROUND: Resolving threats to widely distributed marine megafauna requires definition of the geographic distributions of both the threats as well as the population unit(s) of interest. In turn, because individual threats can operate on varying spatial scales, their impacts can affect different segments of a population of the same species. Therefore, integration of multiple tools and techniques--including site-based monitoring, genetic analyses, mark-recapture studies and telemetry--can facilitate robust definitions of population segments at multiple biological and spatial scales to address different management and research challenges. METHODOLOGY/PRINCIPAL FINDINGS: To address these issues for marine turtles, we collated all available studies on marine turtle biogeography, including nesting sites, population abundances and trends, population genetics, and satellite telemetry. We georeferenced this information to generate separate layers for nesting sites, genetic stocks, and core distributions of population segments of all marine turtle species. We then spatially integrated this information from fine- to coarse-spatial scales to develop nested envelope models, or Regional Management Units (RMUs), for marine turtles globally. CONCLUSIONS/SIGNIFICANCE: The RMU framework is a solution to the challenge of how to organize marine turtles into units of protection above the level of nesting populations, but below the level of species, within regional entities that might be on independent evolutionary trajectories. Among many potential applications, RMUs provide a framework for identifying data gaps, assessing high diversity areas for multiple species and genetic stocks, and evaluating conservation status of marine turtles. Furthermore, RMUs allow for identification of geographic barriers to gene flow, and can provide valuable guidance to marine spatial planning initiatives that integrate spatial distributions of protected species and human activities. In addition, the RMU framework--including maps and supporting metadata--will be an iterative, user-driven tool made publicly available in an online application for comments, improvements, download and analysis.

Where conservation resources are limited and conservation targets are diverse, robust yet flexible priority-setting frameworks are vital. Priority-setting is especially important for geographically widespread species with distinct populations subject to multiple threats that operate on different spatial and temporal scales. Marine turtles are widely distributed and exhibit intra-specific variations in population sizes and trends, as well as reproduction and morphology. However, current global extinction risk assessment frameworks do not assess conservation status of spatially and biologically distinct marine turtle Regional Management Units (RMUs), and thus do not capture variations in population trends, impacts of threats, or necessary conservation actions across individual populations. To address this issue, we developed a new assessment framework that allowed us to evaluate, compare and organize marine turtle RMUs according to status and threats criteria. Because conservation priorities can vary widely (i.e. from avoiding imminent extinction to maintaining long-term monitoring efforts) we developed a "conservation priorities portfolio" system using categories of paired risk and threats scores for all RMUs (n = 58). We performed these assessments and rankings globally, by species, by ocean basin, and by recognized geopolitical bodies to identify patterns in risk, threats, and data gaps at different scales. This process resulted in characterization of risk and threats to all marine turtle RMUs, including identification of the world's 11 most endangered marine turtle RMUs based on highest risk and threats scores. This system also highlighted important gaps in available information that is crucial for accurate conservation assessments. Overall, this priority-setting framework can provide guidance for research and conservation priorities at multiple relevant scales, and should serve as a model for conservation status assessments and priority-setting for widespread, long-lived taxa.

Marine Protected Areas (MPAs) are conservation tools intended to protect biodiversity, promote healthy and resilient marine ecosystems, and provide societal benefits. Despite codification of MPAs in international agreements, MPA effectiveness is currently undermined by confusion about the many MPA types and consequent wildly differing outcomes. We present a clarifying science-driven framework—The MPA Guide—to aid design and evaluation. The guide categorizes MPAs by stage of establishment and level of protection, specifies the resulting direct and indirect outcomes for biodiversity and human well-being, and describes the key conditions necessary for positive outcomes. Use of this MPA Guide by scientists, managers, policy-makers, and communities can improve effective design, implementation, assessment, and tracking of existing and future MPAs to achieve conservation goals by using scientifically grounded practices.

More than US$21 billion is spent annually on biodiversity conservation. Despite their importance for preventing or slowing extinctions and preserving biodiversity, conservation interventions are rarely assessed systematically for their global impact. Islands house a disproportionately higher amount of biodiversity compared with mainlands, much of which is highly threatened with extinction. Indeed, island species make up nearly two-thirds of recent extinctions. Islands therefore are critical targets of conservation. We used an extensive literature and database review paired with expert interviews to estimate the global benefits of an increasingly used conservation action to stem biodiversity loss: eradication of invasive mammals on islands. We found 236 native terrestrial insular faunal species (596 populations) that benefitted through positive demographic and/or distributional responses from 251 eradications of invasive mammals on 181 islands. Seven native species (eight populations) were negatively impacted by invasive mammal eradication. Four threatened species had their International Union for the Conservation of Nature (IUCN) Red List extinction-risk categories reduced as a direct result of invasive mammal eradication, and no species moved to a higher extinction-risk category. We predict that 107 highly threatened birds, mammals, and reptiles on the IUCN Red List-6% of all these highly threatened species-likely have benefitted from invasive mammal eradications on islands. Because monitoring of eradication outcomes is sporadic and limited, the impacts of global eradications are likely greater than we report here. Our results highlight the importance of invasive mammal eradication on islands for protecting the world's most imperiled fauna.

Mediterranean cork oak savannas, which are found only in southwestern Europe and northwestern Africa, are ecosystems of high socioeconomic and conservation value. Characterized by sparse tree cover and a diversity of understory vegetation – ranging from shrub formations to grasslands – that support high levels of biodiversity, these ecosystems require active management and use by humans to ensure their continued existence. The most important product of these savannas is cork, a non‐timber forest product that is periodically harvested without requiring tree felling. Market devaluation of, and lower demand for, cork are causing a decline in management, or even abandonment, of southwestern Europe's cork oak savannas. Subsequent shrub encroachment into the savanna's grassland components reduces biodiversity and degrades the services provided by these ecosystems. In contrast, poverty‐driven overuse is degrading cork oak savannas in northwestern Africa. “Payment for ecosystem services” schemes, such as Forest Stewardship Council (FSC) certification or Reducing Emissions from Deforestation and Degradation and enhancement of carbon stocks (REDD+) programs, could produce novel economic incentives to promote sustainable use and conservation of Mediterranean cork oak savanna ecosystems in both Europe and Africa.

Marine protected areas (MPAs) have largely proven to be effective tools for conserving marine ecosystem, while socio-economic benefits generated by MPAs to fisheries are still under debate. Many MPAs embed a no-take zone, aiming to preserve natural populations and ecosystems, within a buffer zone where potentially sustainable activities are allowed. Small-scale fisheries (SSF) within buffer zones can be highly beneficial by promoting local socio-economies. However, guidelines to successfully manage SSFs within MPAs, ensuring both conservation and fisheries goals, and reaching a win-win scenario, are largely unavailable. From the peer-reviewed literature, grey-literature and interviews, we assembled a unique database of ecological, social and economic attributes of SSF in 25 Mediterranean MPAs. Using random forest with Boruta algorithm we identified a set of attributes determining successful SSFs management within MPAs. We show that fish stocks are healthier, fishermen incomes are higher and the social acceptance of management practices is fostered if five attributes are present (i.e. high MPA enforcement, presence of a management plan, fishermen engagement in MPA management, fishermen representative in the MPA board, and promotion of sustainable fishing). These findings are pivotal to Mediterranean coastal communities so they can achieve conservation goals while allowing for profitable exploitation of fisheries resources.

Marine protected areas (MPAs) are a cornerstone of marine conservation. Globally, the number and coverage of MPAs are increasing, but MPA implementation lags in many human-dominated regions. In areas with intense competition for space and resources, evaluation of the effects of MPAs is crucial to inform decisions. In the human-dominated Mediterranean Sea, fully protected areas occupy only 0.04% of its surface. We evaluated the impacts of full and partial protection on biomass and density of fish assemblages, some commercially important fishes, and sea urchins in 24 Mediterranean MPAs. We explored the relationships between the level of protection and MPA size, age, and enforcement. Results revealed significant positive effects of protection for fisheries target species and negative effects for urchins as their predators benefited from protection. Full protection provided stronger effects than partial protection. Benefits of full protection for fish biomass were only correlated with the level of MPA enforcement; fish density was higher in older, better enforced, and -interestingly- smaller MPAs. Our finding that even small, well-enforced, fully protected areas can have significant ecological effects is encouraging for "crowded" marine environments. However, more data are needed to evaluate sufficient MPA sizes for protecting populations of species with varying mobility levels.

Sea turtle by-catch data in the Mediterranean were reviewed and analysed with fishing effort. The results indicate over 132 000 captures per year, with probably over 44 000 incidental deaths per year, while many others are killed intentionally. Small vessels using set net, demersal longline or pelagic longline represent most of the Mediterranean fleet and likely cause more incidental or intentional deaths than large vessels typically using bottom trawl or pelagic longline. When interactions, mortality, intentional killing, size (a proxy for reproductive value) and turtle populations are considered, results indicate that Mediterranean green (Chelonia mydas) and loggerhead turtles (Caretta caretta) are more affected (i) by fishing gears such as bottom trawlers, demersal longlines and set nets, (ii) by small-scale fisheries, and (iii) by fishing in the eastern basin. Although small-scale fisheries should be the priority target, available measures are easier to implement on the fewer large vessels. Moreover, these measures are few, and they are not implemented yet, while others should still be tested for the Mediterranean fisheries. Thus, measures for reducing captures or mortality through changing gear-specific characteristics may help, but probably a more holistic conservation strategy aimed to an ecosystem-based fishery management for a sustainable fishing would be the only solution for the long-term survival of Mediterranean Sea turtle populations and their habitats. Small-scale fisheries should manage marine resources, including turtles, in a responsible and sustainable way. Turtles may not only benefit from but can also help this process if their non-consumptive value is fully recognized.

In the central Mediterranean Sea, gut contents and feces of 95 turtles captured by bottom trawlers and pelagic longliners fishing in neritic and oceanic areas, respectively, were examined. Benthic prey were more abundant than pelagic, a probable bias due to the higher digestibility of the latter. Animal and plant taxa belonging to 12 Phyla and 20 Classes were observed, with 63 new records of prey species, and Malacostraca, Gastropoda, and Echinoidea were the most commonly occurring animal classes. Results showed a highly opportunistic foraging behavior by the turtles on both live and dead material in the epipelagic zone as well as on all types of seafloor. Benthic taxa were found in turtles as small as 26 cm curved carapace length (CCL), indicating an early use of benthic resources, and also among turtles over a wide size range caught by pelagic longliners. The lack of evidence of a strict oceanic/ pelagic stage and of a clear habitat shift in the observed size range (25 to 80.3 cm CCL), when considered together with other recent findings, challenges the current ontogenetic model of life history for the species. A relaxed model is proposed, with an early short obligate epipelagic stage due to limited diving capacity, followed by the main opportunistic amphi-habitat stage, with a tendency to prefer benthic prey as turtles grow and their benthic foraging efficiency improves. Under this model, temporary or permanent association or fidelity to specific oceanic or neritic zones would vary among individuals or populations according to food availability and oceanographic features in the foraging or migratory areas.

This paper presents an update on the global sturgeon and caviar production until 2017, attempting to continue previous efforts on summarizing the global trends in these markets. For the current update, an expanded data base was derived from questionnaires sent to 86 regional contacts in 46 countries, mostly farmers or scientists, and personal interviews. A total of 2,329 commercial sturgeon farms were recorded by 2017 globally, which represented an increase by 7% compared to 2016. Of these farms 54% were located in China, followed by Russia (24%), the Middle East (8%), the Far East (7%) and Europe (6%). Among the rearing technologies flow-through (FT) systems (36%) were most common, followed by recirculation aquaculture systems (RAS) (21%), cages (18%), mix FT/RAS (11%), and ponds (6%). In total the aquaculture sturgeon biomass production peaked at about 129,608 t in the year 2015, with a decline to 119,979 t in 2016, and to 102,327 t in 2017. China contributed about 79,638 t to the overall production in 2017, followed by Russia (6,800 t), Armenia (6,000 t), Iran (2,514 t), and 52 other countries with less than 1,000 t each. This production exceeded the fishery harvest during the 1970–1980s by more than four times. Of the 25 species of Acipenseridae, 13 pure species and four hybrids were farmed for meat with Acipenser baerii dominating production in 2016 with a share of 39.5%, followed by the two hybrids, Huso dauricus × Acipenser schrenckii and A. baerii × A. schrenckii (35.6%), as well as A. schrenckii (10.2%). Global caviar production increased during the last years and the production for the year 2017 amounted to approximately 364 t. China contributed more than 100 t to the overall production in 2017, followed by Russia (49 t), Italy (43 t), France (37 t) and diverse other countries. The species composition in caviar production in 2016 was dominated by A. baerii (31% of the total volume), followed by Acipenser gueldenstaedtii (20%), the hybrid H. dauricus × A. schrenckii (13%), and Acipenser transmontanus (12%), while other species jointly contributed 24% to the overall yield. The trends of sturgeon meat and caviar productions of the last 5 years and the forecasts for the future suggest a short-term scenario in which the demand remains lower than the supply. In order to absorb the growing production, the market will have to be expanded by targeting new market segments.

Abstract Spatio‐temporal distribution and anthropogenic mortality factors were investigated in loggerhead turtles ( Caretta caretta ) found stranded or floating in the waters around Italy. A total of 5938 records for the period 1980–2008 were analysed concerning loggerhead turtles measuring from 3.8 to 97 cm curved carapace length (mean: 48.3 cm). Results highlighted the following conservation issues: (i) in the study area, anthropogenic mortality is higher than natural mortality; (ii) interaction with fisheries is by far the most important anthropogenic mortality factor; (iii) longlines are an important mortality factor in the southern areas; (iv) trawlers are the cause of high numbers of dead strandings in the north Adriatic; (v) entanglement in ghost‐gear or in other anthropogenic debris affects high numbers of turtles; and (vi) boat strikes are an important source of mortality in most areas but mostly in the warm seasons. Results also indicate that: (vii) the north Adriatic is the area with the highest turtle density; and (viii) the south Adriatic and to a lesser extent the surrounding areas of the north Adriatic and the Ionian, are important developmental areas for loggerhead turtles in the first years of life. Italy is in the centre of the Mediterranean Sea and borders major foraging areas for the loggerhead turtles in the region, and these results confirm previous concerns about the level of anthropogenic mortality in Italian waters. Copyright © 2010 John Wiley & Sons, Ltd.

Small-scale fisheries (SSF) in tropical seascapes (mosaics of interconnected mangroves, seagrasses and corals) are crucial for food and income. However, management is directed mostly to corals and mangroves. This research analyzes the importance of seagrasses compared to adjacent ecosystems in Chwaka Bay, Zanzibar, Tanzania. Using fish landings; the study investigated: location of fishing effort, fish production (biomass and species), and monetary benefits (aggregated value and per capita income). Seagrasses were the most visited grounds providing highest community benefits. Per capita benefits were equivalent to those from corals and mangroves. All three habitats provided income just above extreme poverty levels; however catches from seagrass appeared more stable. Seagrass are key ecosystems supporting SSF and protection and management are urgently needed. Adoption of a seascape approach considering all ecosystems underpinning SSF and the social aspects of fishing and a shift in emphasis from pure conservation to sustainable resource management would be desirable.

Protected areas (PAs) are a cornerstone of global conservation and central to international plans to minimize global extinctions. During the coming century, global ecosystem destruction and fragmentation associated with increased human population and economic activity could make the long-term survival of most terrestrial vertebrates even more dependent on PAs. However, the capacity of the current global PA network to sustain species for the long term is unknown. Here, we explore this question for all nonvolant terrestrial mammals for which we found sufficient data, ∼4,000 species. We first estimate the potential population size of each such mammal species in each PA and then use three different criteria to estimate if solely the current global network of PAs might be sufficient for their long-term survival. Our analyses suggest that current PAs may fail to provide robust protection for about half the species analyzed, including most species currently listed as threatened with extinction and a third of species not currently listed as threatened. Hundreds of mammal species appear to have no viable protected populations. Underprotected species were found across all body sizes, taxonomic groups, and geographic regions. Large-bodied mammals, endemic species, and those in high-biodiversity tropical regions were particularly poorly protected by existing PAs. As new international biodiversity targets are formulated, our results suggest that the global network of PAs must be greatly expanded and most importantly that PAs must be located in diverse regions that encompass species not currently protected and must be large enough to ensure that protected species can persist for the long term.

It is widely accepted that the age at sexual maturity of sea turtles is a critical parameter for studying population dynamics and persistence. Estimates of the age at maturity for such longlived species are derived using somatic growth models, which are still lacking for several regions of the world. In the present study, the growth rate of the loggerhead sea turtle Caretta caretta in the Mediterranean was investigated using a length-frequency analysis of a dataset collected over a 19 yr period (1990 to 2008). A total of 2255 individuals were measured in the central Mediterranean, with turtle size ranging from 16.8 to 97.5 cm curved carapace length (CCL). Monthly length-frequency histograms were constructed, and strong size modes were identified, assumed to represent individual cohorts. Growth rates were calculated by tracking the progression of the modes, by means of a modal progression analysis. Annual growth rates ranged from 0.37 to 6.5 cm yr -1 . A von Bertalanffy growth function was used to estimate the time required by turtles to grow within the observed size range. The results indicate that turtles would take from 23.5 to 29.3 yr to reach 80 cm CCL, considered an approximation of the size at maturity. This estimation integrates and confirms a previous estimate obtained using a different method. It provides information vital to understanding the population dynamics of loggerhead turtles in the Mediterranean, and highlights the value of datasets of longterm series when investigating critical demographic parameters.

The main objectives of this review are: 1) the compilation and updating of a reference database for Italian saproxylic beetles, useful to assess the trend of their populations and communities in the next decades; 2) the identification of the major threats involving the known Italian species of saproxylic beetles; 3) the evaluation of the extinction risk for all known Italian species of saproxylic beetles; 4) the or- ganization of an expert network for studying and continuous updating of all known species of saproxylic beetle species in Italy; 5) the creation of a baseline for future evaluations of the trends in biodiversity conservation in Italy; 6) the assignment of ecological categories to all the Italian saproxylic beetles, useful for the aims of future researches on their communities and on forest environments. The assess- ments of extinction risk are based on the IUCN Red List Categories and Criteria and the most updated guidelines. The assessments have been carried out by experts covering different regions of Italy, and have been evaluated according to the IUCN standards. All the beetles whose larval biology is sufficiently well known as to be considered saproxylic have been included in the Red List, either the autochtho- nous species (native or possibly native to Italy) or a few allochthonous species recently introduced or probably introduced to Italy in his- toric times. The entire national range of each saproxylic beetle species was evaluated, including large and small islands; for most species, the main parameters considered for evaluation were the extent of their geographical occurrence in Italy, and the number of known sites of presence. 2049 saproxylic beetle species (belonging to 66 families) have been listed, assigned to a trophic category (Table 3) and 97% of them have been assessed. On the whole, threatened species (VU + EN + CR) are 421 (Fig. 6), corresponding to 21 % of the 1988 as- sessed species; only two species are formally recognized to be probably Regionally Extinct in Italy in recent times. Little less than 65% of the Italian saproxylic beetles are not currently threatened with extinction, although their populations are probably declining. In forest environments, the main threats are habitat loss and fragmentation, pollution due to the use of pesticide against forest pests, and habitat simplification due to economic forest management. In coastal environments, the main threats are due to massive touristic exploitation such as the excess of urbanization and infrastructures along the seashore, and the complete removal of woody materials as tree trunks stranded on the beaches, because this kind of intervention is considered an aesthetic amelioration of seaside resorts. The number of spe- cies whose populations may become impoverished by direct harvest (only a few of large forest beetles frequently collected by insect traders) is very small and almost negligible. The Red List is a fundamental tool for the identification of conservation priorities, but it is not a list of priorities on its own. Other elements instrumental to priority setting include the cost of actions, the probability of success,and the proportion of the global population of each species living in Italy, which determines the national responsibility in the long-term conservation of that species. In this scenario, information on all species endemic to Italy, to Corso-Sardinia, to the Tuscan-Corsican ar- eas, and to the Siculo-Maltese insular system are given. A short analysis on relationships among beetle species traits, taxonomy, special- ist approaches, and IUCN Categories of Risk is also presented.

The Pelagos Sanctuary is the largest marine protected area of the Mediterranean Sea (87 500 km2), and is located in the north-west part of the basin. The presence of the bottlenose dolphin in this area is well documented but its distribution and abundance are not well known. The present study collected and analysed data from 10 different research groups operating in the Pelagos Sanctuary from 1994 to 2007. Photo-identification data were used to analyse the displacement behaviour of the dolphins and to estimate their abundance through mark–recapture modelling. Results show that the distribution of bottlenose dolphin is confined to the continental shelf within the 200 m isobath, with a preference for shallow waters of less than 100 m depth. Bottlenose dolphins seem to be more densely present in the eastern part of the sanctuary and along the north-west coast of Corsica. Bottlenose dolphins show a residential attitude with excursions usually within a distance of 80 km (50 km on average). A few dolphins exhibit more wide-ranging journeys, travelling up to 427 km between sub-areas. The displacement analysis identified two (sub)populations of bottlenose dolphins, one centred on the eastern part of the sanctuary and the other one around the west coast of Corsica. In 2006, the eastern (sub)population was estimated to comprise 510–552 individuals, while 368–429 individuals were estimated in the Corsican (sub)population. It was estimated that in total, 884–1023 bottlenose dolphins were living in the Pelagos Sanctuary MPA in the same year. The designation of a number of Special Areas of Conservation (SACs) under the Habitats Directive is discussed as a possible tool to protect the bottlenose dolphin in the Pelagos Sanctuary and in the whole of the Mediterranean Sea. Copyright © 2011 John Wiley & Sons, Ltd.

Hybridization is a natural or anthropogenic process that can deeply affect the genetic make-up of populations, possibly decreasing individual fitness but sometimes favoring local adaptations. The population of Italian wolves (Canis lupus), after protracted demographic declines and isolation, is currently expanding in anthropic areas, with documented cases of hybridization with stray domestic dogs. However, identifying admixture patterns in deeply introgressed populations is far from trivial. In this study, we used a panel of 170,000 SNPs analyzed with multivariate, Bayesian and local ancestry reconstruction methods to identify hybrids, estimate their ancestry proportions and timing since admixture. Moreover, we carried out preliminary genotype-phenotype association analyses to identify the genetic bases of three phenotypic traits (black coat, white claws, and spur on the hind legs) putative indicators of hybridization. Results showed no sharp subdivisions between nonadmixed wolves and hybrids, indicating that recurrent hybridization and deep introgression might have started mostly at the beginning of the population reexpansion. In hybrids, we identified a number of genomic regions with excess of ancestry in one of the parental populations, and regions with excess or resistance to introgression compared with neutral expectations. The three morphological traits showed significant genotype-phenotype associations, with a single genomic region for black coats and white claws, and with multiple genomic regions for the spur. In all cases the associated haplotypes were likely derived from dogs. In conclusion, we show that the use of multiple genome-wide ancestry reconstructions allows clarifying the admixture dynamics even in highly introgressed populations, and supports their conservation management.