Critical Assessment of Metagenome Interpretation: the second round of challenges

Meyer, Fernando; Fritz, Adrian; Deng, Zhi-Luo; Koslicki, David; Robin Lesker, Till; Gurevich, Alexey; Robertson, Gary; Alser, Mohammed; Antipov, Dmitry; Beghini, Francesco; Bertrand, Denis; J. Brito, Jaqueline; Titus Brown, C.; Buchmann, Jan; Buluç, Aydin; Chen, Bo; Chikhi, Rayan; T. L. C. Clausen, Philip; Cristian, Alexandru; Wojciech Dabrowski, Piotr; E. Darling, Aaron; Egan, Rob; Eskin, Eleazar; Georganas, Evangelos; Goltsman, Eugene; A. Gray, Melissa; Hestbjerg Hansen, Lars; Hofmeyr, Steven; Huang, Pingqin; Irber, Luiz; Jia, Huijue; Sparholt Jørgensen, Tue; D. Kieser, Silas; Klemetsen, Terje; Kola, Axel; Kolmogorov, Mikhail; Korobeynikov, Anton; Kwan, Jason; LaPierre, Nathan; Lemaitre, Claire; Li, Chenhao; Limasset, Antoine; Malcher-Miranda, Fabio; Mangul, Serghei; R. Marcelino, Vanessa; Marchet, Camille; Marijon, Pierre; Meleshko, Dmitry; R. Mende, Daniel; Milanese, Alessio; Nagarajan, Niranjan; Nissen, Jakob; Nurk, Sergey; Oliker, Leonid; Paoli, Lucas; Peterlongo, Pierre; C. Piro, Vitor; S. Porter, Jacob; Rasmussen, Simon; R. Rees, Evan; Reinert, Knut; Renard, Bernhard; Mikal Robertsen, Espen; L. Rosen, Gail; Ruscheweyh, Hans-Joachim; Sarwal, Varuni; Segata, Nicola; Seiler, Enrico; Shi, Lizhen; Sun, Fengzhu; Sunagawa, Shinichi; Johannes Sørensen, Søren; Thomas, Ashleigh; Tong, Chengxuan; Trajkovski, Mirko; Tremblay, Julien; Uritskiy, Gherman; Vicedomini, Riccardo; Wang, Zhengyang; Wang, Ziye; Wang, Zhong; Warren, Andrew; Peder Willassen, Nils; Yelick, Katherine; You, Ronghui; Zeller, Georg; Zhao, Zhengqiao; Zhu, Shanfeng; Zhu, Jie; Garrido-Oter, Ruben; Gastmeier, Petra; Hacquard, Stephane; Häußler, Susanne; Khaledi, Ariane; Maechler, Friederike; Mesny, Fantin; Radutoiu, Simona; Schulze-Lefert, Paul; Smit, Nathiana; Strowig, Till; Bremges, Andreas; Sczyrba, Alexander; Carolyn McHardy, Alice

doi:10.1038/s41592-022-01431-4

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Critical Assessment of Metagenome Interpretation: the second round of challenges

Shared by NobleBlocks on Apr 1, 2022 • 12:00 AM UTC

Authors:

Fernando Meyer

Adrian Fritz

Zhi-Luo Deng

Abstract

Abstract Evaluating metagenomic software is key for optimizing metagenome interpretation and focus of the Initiative for the Critical Assessment of Metagenome Interpretation (CAMI). The CAMI II challenge engaged the community to assess methods on realistic and complex datasets with long- and short-r...

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